| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474514
Identifier: 13474514
GI number: 13474514
Start: 4329757
End: 4330584
Strand: Reverse
Name: 13474514
Synonym: mll5414
Alternate gene names: NA
Gene position: 4330584-4329757 (Counterclockwise)
Preceding gene: 13474515
Following gene: 13474511
Centisome position: 61.55
GC content: 66.3
Gene sequence:
>828_bases GTGACCTCGGTTTTGGAAAAACGACATGCACCAAAACAAAGAGCTGAAGCGCAGCGCGCTTTAACGGGGGAAGATTTCGT CGGCGACGAGGCGCCGGGCAAGGATTTGCCAAGCCGCCCGCGCCTCGACCCGGCGGAGTTCATCAAGGCGAACATGGGCC TTGTTCCTGTGCTGGCGCTTCCCGAAATCCGGTTCTACACCGCCCATCCGGGCAGCGGGCTGAGACGCCTCGTCGACCCC GAAGACGATGCTGACGCGGACGACGACACGCCGGAGCCGCAGCCGCCCTACTGGGCCTATGCATGGGCCGGTGGTGCGGT GCTGGCACGCCACATCCTCAACCATCCGAAGACGGTGGCGGGCCGCCGCGTGCTGGACCTCGGCGCGGGTTCAGGCATTG TCGGCATTGCCGCTGCCAAAGCCGGCGCAAGCGAGGTGATAGCCGCCGAGATCGACCGCAACGGTGTCGCCGCTATCGGC CTCAACGCGGCGGCCAACGGGGTCGAGATCACTATCGTGCACCAGGATATCACCATGGGCTCGCCGCCGGCCGTCGACCT CGTGCTTGCCGGCGACGTGTTCTACGGCCGTGAGGTCGCCCTGCGGGTTATCCCGTTCCTCGACCGCTGCCTGGCAGCCG GCATCGAGGTGCTGGTCGGCGATCCCCGTCGCCATGACCTGCCGCTGTCCCGGCTGCGACTGCTCGCCGAATATCAGGTG CCGGATTTCGGTGACGCGAAAGACGCCGCGCTGAAGCCGAGCGGCGTCTTTCGTTTCGAGGCCGAGACCGCACCAGCGCT GGCGGGAGCGATCAAACCGTCTCCTTGA
Upstream 100 bases:
>100_bases AAACGGCCCAAATATATCGAGTTCAGGACCGAATTGCCGAAGACGCCGGTCGGCAAGATCCTGCGGCGGGCATTGCGCGC CTGATGCAGGTCGCCCAAAA
Downstream 100 bases:
>100_bases CCCGGGCCGACAGGAAGTCCGGCAGATCGGCAACGGAATCGAGAACGACGTCGGCAATGCCAGCCAGCGACTCACGCGTG CCGGTGCCGGAGAGCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Small; Methyltransferase Protein; Methyltransferase; SAM-Dependent Methyltransferease Protein; Methyltransferase-Like Protein; C12orf72 Protein
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTSVLEKRHAPKQRAEAQRALTGEDFVGDEAPGKDLPSRPRLDPAEFIKANMGLVPVLALPEIRFYTAHPGSGLRRLVDP EDDADADDDTPEPQPPYWAYAWAGGAVLARHILNHPKTVAGRRVLDLGAGSGIVGIAAAKAGASEVIAAEIDRNGVAAIG LNAAANGVEITIVHQDITMGSPPAVDLVLAGDVFYGREVALRVIPFLDRCLAAGIEVLVGDPRRHDLPLSRLRLLAEYQV PDFGDAKDAALKPSGVFRFEAETAPALAGAIKPSP
Sequences:
>Translated_275_residues MTSVLEKRHAPKQRAEAQRALTGEDFVGDEAPGKDLPSRPRLDPAEFIKANMGLVPVLALPEIRFYTAHPGSGLRRLVDP EDDADADDDTPEPQPPYWAYAWAGGAVLARHILNHPKTVAGRRVLDLGAGSGIVGIAAAKAGASEVIAAEIDRNGVAAIG LNAAANGVEITIVHQDITMGSPPAVDLVLAGDVFYGREVALRVIPFLDRCLAAGIEVLVGDPRRHDLPLSRLRLLAEYQV PDFGDAKDAALKPSGVFRFEAETAPALAGAIKPSP >Mature_274_residues TSVLEKRHAPKQRAEAQRALTGEDFVGDEAPGKDLPSRPRLDPAEFIKANMGLVPVLALPEIRFYTAHPGSGLRRLVDPE DDADADDDTPEPQPPYWAYAWAGGAVLARHILNHPKTVAGRRVLDLGAGSGIVGIAAAKAGASEVIAAEIDRNGVAAIGL NAAANGVEITIVHQDITMGSPPAVDLVLAGDVFYGREVALRVIPFLDRCLAAGIEVLVGDPRRHDLPLSRLRLLAEYQVP DFGDAKDAALKPSGVFRFEAETAPALAGAIKPSP
Specific function: Unknown
COG id: COG3897
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209529731, Length=172, Percent_Identity=35.4651162790698, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI209529729, Length=172, Percent_Identity=35.4651162790698, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI28603834, Length=172, Percent_Identity=35.4651162790698, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI115533699, Length=202, Percent_Identity=29.7029702970297, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29087; Mature: 28956
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLEKRHAPKQRAEAQRALTGEDFVGDEAPGKDLPSRPRLDPAEFIKANMGLVPVLAL CCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC PEIRFYTAHPGSGLRRLVDPEDDADADDDTPEPQPPYWAYAWAGGAVLARHILNHPKTVA CCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH GRRVLDLGAGSGIVGIAAAKAGASEVIAAEIDRNGVAAIGLNAAANGVEITIVHQDITMG CCEEEEECCCCCEEEEEECCCCCHHEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCC SPPAVDLVLAGDVFYGREVALRVIPFLDRCLAAGIEVLVGDPRRHDLPLSRLRLLAEYQV CCCCEEEEEECCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCC PDFGDAKDAALKPSGVFRFEAETAPALAGAIKPSP CCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure TSVLEKRHAPKQRAEAQRALTGEDFVGDEAPGKDLPSRPRLDPAEFIKANMGLVPVLAL CCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC PEIRFYTAHPGSGLRRLVDPEDDADADDDTPEPQPPYWAYAWAGGAVLARHILNHPKTVA CCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH GRRVLDLGAGSGIVGIAAAKAGASEVIAAEIDRNGVAAIGLNAAANGVEITIVHQDITMG CCEEEEECCCCCEEEEEECCCCCHHEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCC SPPAVDLVLAGDVFYGREVALRVIPFLDRCLAAGIEVLVGDPRRHDLPLSRLRLLAEYQV CCCCEEEEEECCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCC PDFGDAKDAALKPSGVFRFEAETAPALAGAIKPSP CCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA