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The map label for this gene is fdhD [H]

Identifier: 13474497

GI number: 13474497

Start: 4308442

End: 4309272

Strand: Reverse

Name: fdhD [H]

Synonym: mll5395

Alternate gene names: 13474497

Gene position: 4309272-4308442 (Counterclockwise)

Preceding gene: 13474498

Following gene: 13474496

Centisome position: 61.25

GC content: 65.7

Gene sequence:

>831_bases
GTGGCCGCGCGCCGCAAAGCAACGACTGAGATATCGCGGCTGGCGCACCGCGCCAGCGGCGCGGCCGTTGCCAACCGCAT
GGTGCCGGAGGAGACGCCGGTAGCGTTTTCCTTTGCCGGAACCACGCATGCGGTGATGATGGCGAGCCCCGCCGACTTCG
AGGATTTCGCGCTCGGCTTCTCGCTGACGGAAGGCATCATTGCCGACCCGCAAGAGGTCGAGGCGATCGAGGTCGAGGAC
CATGGCGCCGGCATCGATATCCAGATCCGGCTGAAGGATCAGGCCAATACACGCTTCGAGGCGCGGCGGCGCAGGCTTGC
CGGGCCGGTTGGTTGCGGGCTGTGCGGCATTGAATCCATCGAGGAAGCAATGCGCTCCGTCGATGCCGTTGGTGCGTCAA
AACTTACGCTTGATGCCGACGACATCGTCCGTTCGGTCAAGCTTTTGTCCAAGGTGCAGCCGCTTCACACCGAGACCGGA
GCGGTGCATGCGGCCGGCTTCTATATTCCCGGCAAGGGCGTCGTGATGGCGCGCGAGGATGTCGGCCGCCACAATGCGCT
GGACAAGCTGGCCGGGGCGTTGGCCAAAGCCGGCATCGACGGTGCTTCGGGCGCCGTCGTGGTGACGTCGCGCGTGTCGG
TCGAAATGGTGCAGAAGACGGCGGCGATCGGCTCGGCCTTCATCATCGCCGTCTCGGCGCCGACCGCGCTTGCCATCCGC
ACCGCCGATGAGGCCGGCATGACGCTGGTGGCGCTGGTGCGCGGCGAGGATTTCGATGTTTTCACCCACCCCGACCGGGT
GGTTTCGGGAGTTGCCCAGCATGTCGCATGA

Upstream 100 bases:

>100_bases
AGGTCGGCGCCTCCAACGGCCCGTCGGATTGGCAGCGCGAGTATGACGAGCAGGCGAGGAACAGCCGCCGCATCGCCTCG
CTGCAGGCGGCGGAGTAGCT

Downstream 100 bases:

>100_bases
CGAAGACCATATCACGAGCACCAGCGAAAAGCTGGTGCGCATGGCCAACCAAATCGCGGCCTTCTTCCATTCCAAGTCGC
GCGAGGAAGGTGTTGCCGGT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAARRKATTEISRLAHRASGAAVANRMVPEETPVAFSFAGTTHAVMMASPADFEDFALGFSLTEGIIADPQEVEAIEVED
HGAGIDIQIRLKDQANTRFEARRRRLAGPVGCGLCGIESIEEAMRSVDAVGASKLTLDADDIVRSVKLLSKVQPLHTETG
AVHAAGFYIPGKGVVMAREDVGRHNALDKLAGALAKAGIDGASGAVVVTSRVSVEMVQKTAAIGSAFIIAVSAPTALAIR
TADEAGMTLVALVRGEDFDVFTHPDRVVSGVAQHVA

Sequences:

>Translated_276_residues
MAARRKATTEISRLAHRASGAAVANRMVPEETPVAFSFAGTTHAVMMASPADFEDFALGFSLTEGIIADPQEVEAIEVED
HGAGIDIQIRLKDQANTRFEARRRRLAGPVGCGLCGIESIEEAMRSVDAVGASKLTLDADDIVRSVKLLSKVQPLHTETG
AVHAAGFYIPGKGVVMAREDVGRHNALDKLAGALAKAGIDGASGAVVVTSRVSVEMVQKTAAIGSAFIIAVSAPTALAIR
TADEAGMTLVALVRGEDFDVFTHPDRVVSGVAQHVA
>Mature_275_residues
AARRKATTEISRLAHRASGAAVANRMVPEETPVAFSFAGTTHAVMMASPADFEDFALGFSLTEGIIADPQEVEAIEVEDH
GAGIDIQIRLKDQANTRFEARRRRLAGPVGCGLCGIESIEEAMRSVDAVGASKLTLDADDIVRSVKLLSKVQPLHTETGA
VHAAGFYIPGKGVVMAREDVGRHNALDKLAGALAKAGIDGASGAVVVTSRVSVEMVQKTAAIGSAFIIAVSAPTALAIRT
ADEAGMTLVALVRGEDFDVFTHPDRVVSGVAQHVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=42.0833333333333, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28822; Mature: 28691

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRKATTEISRLAHRASGAAVANRMVPEETPVAFSFAGTTHAVMMASPADFEDFALGF
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHH
SLTEGIIADPQEVEAIEVEDHGAGIDIQIRLKDQANTRFEARRRRLAGPVGCGLCGIESI
HHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHH
EEAMRSVDAVGASKLTLDADDIVRSVKLLSKVQPLHTETGAVHAAGFYIPGKGVVMARED
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEHHH
VGRHNALDKLAGALAKAGIDGASGAVVVTSRVSVEMVQKTAAIGSAFIIAVSAPTALAIR
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCEEEEE
TADEAGMTLVALVRGEDFDVFTHPDRVVSGVAQHVA
ECCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHCC
>Mature Secondary Structure 
AARRKATTEISRLAHRASGAAVANRMVPEETPVAFSFAGTTHAVMMASPADFEDFALGF
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHH
SLTEGIIADPQEVEAIEVEDHGAGIDIQIRLKDQANTRFEARRRRLAGPVGCGLCGIESI
HHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHH
EEAMRSVDAVGASKLTLDADDIVRSVKLLSKVQPLHTETGAVHAAGFYIPGKGVVMARED
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEHHH
VGRHNALDKLAGALAKAGIDGASGAVVVTSRVSVEMVQKTAAIGSAFIIAVSAPTALAIR
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCEEEEE
TADEAGMTLVALVRGEDFDVFTHPDRVVSGVAQHVA
ECCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]