| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474467
Identifier: 13474467
GI number: 13474467
Start: 4277785
End: 4278366
Strand: Reverse
Name: 13474467
Synonym: mll5358
Alternate gene names: NA
Gene position: 4278366-4277785 (Counterclockwise)
Preceding gene: 13474468
Following gene: 13474466
Centisome position: 60.81
GC content: 65.12
Gene sequence:
>582_bases GTGTCGGATCACCGGCCGGCCGCACGTCCTTGGGCAAATAGGAGGAGGACCATCATGAGCACCACAACCTTGCCCGGTTC GACCGTCGCTACGCTGACGGTGACCACGCCCAGCGACCGCGAGGTCCAGATCACCCGCATCTTCGACGCGTCGCGGCCGA TGGTTTTCGACTGCTGGACGATACCCGAGCTGCTGAAGGGCTGGCTGCACGGCCCCGATGGCTGGCGGCTGGCGATCTGT GAAATCGACCTGAGGGTTGGCGGCGCCACGCGCTACGTCTGGCAGCATCGCGATGGCCGAAGCATGGGCATGAGCGGCGC CTATCGCGAAATCGTGCGTCCAGCCAGGATCGTCGCCACCGAACTGTTCGACGAGGACTGGACTGGTGGCGAAACCGTAG GGACCGTGGTCTTCACCGAACAGGCCGGAAAGACGCTGCTGACACAGACGGTGCTTTACGCCTCGCAAGCGGCCCGCGAC GGCGCGCTCGGCACCGGCATGACCCGCGGCATGGGCGAGAGCTATGCCCAGCTCGATGCTTATCTCATTTCACTTCAGGA CGCTGCCAAGGGCGCCGCCTGA
Upstream 100 bases:
>100_bases TGGGAAGGCAACTTCCAGCGCCTCGACGCGTTGCTCGACGCGATGAAGGCCGAGAGAGCCCCCGACAGTACCGACCAATA ACCGAAAAAGATCGCGGCCT
Downstream 100 bases:
>100_bases CCCTTCCTTCACCCCAAGCACCCCAAAGATAAAAACGAGGAGAGACGCATGCAGAAGATCACCACCTTCCTGTGGTTCGA CGGCCAGGCCGAAGAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSDHRPAARPWANRRRTIMSTTTLPGSTVATLTVTTPSDREVQITRIFDASRPMVFDCWTIPELLKGWLHGPDGWRLAIC EIDLRVGGATRYVWQHRDGRSMGMSGAYREIVRPARIVATELFDEDWTGGETVGTVVFTEQAGKTLLTQTVLYASQAARD GALGTGMTRGMGESYAQLDAYLISLQDAAKGAA
Sequences:
>Translated_193_residues MSDHRPAARPWANRRRTIMSTTTLPGSTVATLTVTTPSDREVQITRIFDASRPMVFDCWTIPELLKGWLHGPDGWRLAIC EIDLRVGGATRYVWQHRDGRSMGMSGAYREIVRPARIVATELFDEDWTGGETVGTVVFTEQAGKTLLTQTVLYASQAARD GALGTGMTRGMGESYAQLDAYLISLQDAAKGAA >Mature_192_residues SDHRPAARPWANRRRTIMSTTTLPGSTVATLTVTTPSDREVQITRIFDASRPMVFDCWTIPELLKGWLHGPDGWRLAICE IDLRVGGATRYVWQHRDGRSMGMSGAYREIVRPARIVATELFDEDWTGGETVGTVVFTEQAGKTLLTQTVLYASQAARDG ALGTGMTRGMGESYAQLDAYLISLQDAAKGAA
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21180; Mature: 21049
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHRPAARPWANRRRTIMSTTTLPGSTVATLTVTTPSDREVQITRIFDASRPMVFDCWT CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEECCC IPELLKGWLHGPDGWRLAICEIDLRVGGATRYVWQHRDGRSMGMSGAYREIVRPARIVAT HHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCHHHHHHH ELFDEDWTGGETVGTVVFTEQAGKTLLTQTVLYASQAARDGALGTGMTRGMGESYAQLDA HHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH YLISLQDAAKGAA HHEEHHHHCCCCC >Mature Secondary Structure SDHRPAARPWANRRRTIMSTTTLPGSTVATLTVTTPSDREVQITRIFDASRPMVFDCWT CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEECCC IPELLKGWLHGPDGWRLAICEIDLRVGGATRYVWQHRDGRSMGMSGAYREIVRPARIVAT HHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCHHHHHHH ELFDEDWTGGETVGTVVFTEQAGKTLLTQTVLYASQAARDGALGTGMTRGMGESYAQLDA HHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH YLISLQDAAKGAA HHEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA