| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474423
Identifier: 13474423
GI number: 13474423
Start: 4228869
End: 4230200
Strand: Reverse
Name: 13474423
Synonym: mll5302
Alternate gene names: NA
Gene position: 4230200-4228869 (Counterclockwise)
Preceding gene: 13474424
Following gene: 13474422
Centisome position: 60.12
GC content: 59.46
Gene sequence:
>1332_bases ATGAAATCGAGCTTGAAAATGGCATTGGGACTTGCCTCGGCGATTGCAGCGTCGACAGCCGTCTCAAACGCCGCGCACGC TGAAGACCTGACGCTTTGCTGGGCCGCCTGGGACCCGGCCAACGCACTTGTCGAACTGTCCAAGGATTTTACCAAAGAAA CCGGCATCGGCATGAAATTCGAGTTCGTGCCGTGGACCAACTATGCCGACCGTTTCCTCAATGAACTGAACTCGCACGGC AAATTGTGCGACCTGATCATCGGCGACAGCCAGTGGATCGGCGGCGCGGCCGAGAACGGCCACTACGTCAAGCTGAACGA CTTCTTCGACAAGGAGAATATCAGCATGGACGACTTCGTACCGGCAACCGTCGTCGGCTACTCCGAATGGCCGAAGAACA CGCCGAACTACTGGGCGCTGCCGGCCATGGGCGACGTCGTCGGCTGGACCTATCGCAAGGACTGGTTCTCCAAGCCCGAG CTGCAGAAGGAATTCAAGGCAAAGTATGGCTGGGATCTCGGCCCGCCGGCGACCTTCGACCAGTTGAAGCAGATCGCCGA ATTCTTCCAGAAGCGGCAGATCGACGGCAAGACGGTCTATGGCGCCTCGATCTACACCGAGCGCGGCTCGGAAGGCATCA CCATGGGCGCCATGGACGTGCTCTACAGCTACGGTTTCCAGTATGAAAACCCGAAGAAGCCTTACGAGATGGAAGGCTTC GTCAATTCCGAGAAATCGGTGAAGGGGCTGGAATTCTACAAGGCGCTCTATGATTGTTGCACCCCGCCCGGCGCCTCCAA CAGCTACATGGGCGAAGGCGTCGATGCCTTCAAATCCGGCCAGGTGGCGATGCATATGAACTTCGCCTTCACCTGGCCCG GCCTGCAGAAGGACGAGAATGTCGGCGGCGACAAGATCGGGTACTTCGTCAACCCGAAGGGGCCTGACGGCGACCAGTTC GCGCAGCTCGGTGGCCAGGGCATCTCGGTGGTGTCCTATTCCGACAAGCACGAATCGGCGCTGAAATACATCAAGTGGTT CGCCAACAAGGACGTGCAGGCCAAGTGGTGGTCGCTCGGCGGCTATTCCTGCCTGAACGCCGTGGTGAAGGACCCGAAAT TCCCCGCCAGCCAGCCCTACGCGCAGGCCTTCCTCGACTCGATGGCGATCGTGAAGGATTTCTGGGCCGAGCCCAGCTAC GCGCCGCTGCTGCAGGCCTCGCAGAAGCGCTTCCATGACTATGTCGTCGCCGGCCAGGGTTCGGCCAAGGATGCACTCGA CGGCCTGGTCAAGGACTGGACTCAAGTGTTCCAGGACGATGGCAAGATGTAA
Upstream 100 bases:
>100_bases TCTGCCGCGCTCCGGCGCCGCCATGTTTGGGCCTCTGAGGAGAGAGGTTTAGGGCTCTTGAAACCGTCATCCGGGCGCGT TTCGCAAATGGGAGGAAGGC
Downstream 100 bases:
>100_bases CCGGCTCCTCCCGAGCTAGGCCCAAGCGTCCCGTGCCACCCTTGGCACGGGACGCAGTTCAGATAAATTCCATCACAGAG ACGACCCAAGTGACCGAAGC
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; Abc-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKSSLKMALGLASAIAASTAVSNAAHAEDLTLCWAAWDPANALVELSKDFTKETGIGMKFEFVPWTNYADRFLNELNSHG KLCDLIIGDSQWIGGAAENGHYVKLNDFFDKENISMDDFVPATVVGYSEWPKNTPNYWALPAMGDVVGWTYRKDWFSKPE LQKEFKAKYGWDLGPPATFDQLKQIAEFFQKRQIDGKTVYGASIYTERGSEGITMGAMDVLYSYGFQYENPKKPYEMEGF VNSEKSVKGLEFYKALYDCCTPPGASNSYMGEGVDAFKSGQVAMHMNFAFTWPGLQKDENVGGDKIGYFVNPKGPDGDQF AQLGGQGISVVSYSDKHESALKYIKWFANKDVQAKWWSLGGYSCLNAVVKDPKFPASQPYAQAFLDSMAIVKDFWAEPSY APLLQASQKRFHDYVVAGQGSAKDALDGLVKDWTQVFQDDGKM
Sequences:
>Translated_443_residues MKSSLKMALGLASAIAASTAVSNAAHAEDLTLCWAAWDPANALVELSKDFTKETGIGMKFEFVPWTNYADRFLNELNSHG KLCDLIIGDSQWIGGAAENGHYVKLNDFFDKENISMDDFVPATVVGYSEWPKNTPNYWALPAMGDVVGWTYRKDWFSKPE LQKEFKAKYGWDLGPPATFDQLKQIAEFFQKRQIDGKTVYGASIYTERGSEGITMGAMDVLYSYGFQYENPKKPYEMEGF VNSEKSVKGLEFYKALYDCCTPPGASNSYMGEGVDAFKSGQVAMHMNFAFTWPGLQKDENVGGDKIGYFVNPKGPDGDQF AQLGGQGISVVSYSDKHESALKYIKWFANKDVQAKWWSLGGYSCLNAVVKDPKFPASQPYAQAFLDSMAIVKDFWAEPSY APLLQASQKRFHDYVVAGQGSAKDALDGLVKDWTQVFQDDGKM >Mature_443_residues MKSSLKMALGLASAIAASTAVSNAAHAEDLTLCWAAWDPANALVELSKDFTKETGIGMKFEFVPWTNYADRFLNELNSHG KLCDLIIGDSQWIGGAAENGHYVKLNDFFDKENISMDDFVPATVVGYSEWPKNTPNYWALPAMGDVVGWTYRKDWFSKPE LQKEFKAKYGWDLGPPATFDQLKQIAEFFQKRQIDGKTVYGASIYTERGSEGITMGAMDVLYSYGFQYENPKKPYEMEGF VNSEKSVKGLEFYKALYDCCTPPGASNSYMGEGVDAFKSGQVAMHMNFAFTWPGLQKDENVGGDKIGYFVNPKGPDGDQF AQLGGQGISVVSYSDKHESALKYIKWFANKDVQAKWWSLGGYSCLNAVVKDPKFPASQPYAQAFLDSMAIVKDFWAEPSY APLLQASQKRFHDYVVAGQGSAKDALDGLVKDWTQVFQDDGKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49299; Mature: 49299
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLKMALGLASAIAASTAVSNAAHAEDLTLCWAAWDPANALVELSKDFTKETGIGMKF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE EFVPWTNYADRFLNELNSHGKLCDLIIGDSQWIGGAAENGHYVKLNDFFDKENISMDDFV EEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCC PATVVGYSEWPKNTPNYWALPAMGDVVGWTYRKDWFSKPELQKEFKAKYGWDLGPPATFD CHHEECCHHCCCCCCCEEECCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHH QLKQIAEFFQKRQIDGKTVYGASIYTERGSEGITMGAMDVLYSYGFQYENPKKPYEMEGF HHHHHHHHHHHHCCCCCEEECEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VNSEKSVKGLEFYKALYDCCTPPGASNSYMGEGVDAFKSGQVAMHMNFAFTWPGLQKDEN CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCC VGGDKIGYFVNPKGPDGDQFAQLGGQGISVVSYSDKHESALKYIKWFANKDVQAKWWSLG CCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCC GYSCLNAVVKDPKFPASQPYAQAFLDSMAIVKDFWAEPSYAPLLQASQKRFHDYVVAGQG CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCC SAKDALDGLVKDWTQVFQDDGKM CHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSSLKMALGLASAIAASTAVSNAAHAEDLTLCWAAWDPANALVELSKDFTKETGIGMKF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE EFVPWTNYADRFLNELNSHGKLCDLIIGDSQWIGGAAENGHYVKLNDFFDKENISMDDFV EEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCC PATVVGYSEWPKNTPNYWALPAMGDVVGWTYRKDWFSKPELQKEFKAKYGWDLGPPATFD CHHEECCHHCCCCCCCEEECCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHH QLKQIAEFFQKRQIDGKTVYGASIYTERGSEGITMGAMDVLYSYGFQYENPKKPYEMEGF HHHHHHHHHHHHCCCCCEEECEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VNSEKSVKGLEFYKALYDCCTPPGASNSYMGEGVDAFKSGQVAMHMNFAFTWPGLQKDEN CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCC VGGDKIGYFVNPKGPDGDQFAQLGGQGISVVSYSDKHESALKYIKWFANKDVQAKWWSLG CCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCC GYSCLNAVVKDPKFPASQPYAQAFLDSMAIVKDFWAEPSYAPLLQASQKRFHDYVVAGQG CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCC SAKDALDGLVKDWTQVFQDDGKM CHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA