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The map label for this gene is amyD [H]

Identifier: 13474422

GI number: 13474422

Start: 4227811

End: 4228758

Strand: Reverse

Name: amyD [H]

Synonym: mll5301

Alternate gene names: 13474422

Gene position: 4228758-4227811 (Counterclockwise)

Preceding gene: 13474423

Following gene: 13474421

Centisome position: 60.1

GC content: 60.44

Gene sequence:

>948_bases
ATGCTCAATCGGACCGCGGAGAACGTTGCCCGGGCGACCCCGGAACCGTTGGCCCGCAAAGTCCGGGGCATCAGCGACAA
GGGCCTCGCCTGGCTGTTCATTTCGCCGACGATCCTGTTGCTGCTGGCCATCAACATCTTCCCGCTGTTTTGGGCGATCT
ATCTGTCCTTCACCAACTACCGGGCCAACCGGCCGAACGAAGTGGTGAAGAATCTCGGCTTTGCCAACTACCAGCGCATC
CTGGGCGACCATGACATCTGGATCGCCATGCAGACGACGGCGCATTTCGTGTTCTGGACTATCCTGTTGGAAACGCTGAT
CGGCTTCACGCTCGCCTGGCTGATCGACCGGAAATTCCGCGGCCACGCCTTCTGGACGACGCTGATCCTGGTGCCGATGA
TGCTGTCGCCGGCGGTGGTCGGCAATTTCTGGCGCTTCCTCTACGAGCCGCAGATCGGCCTGTTCTCCTATGTCATCTCG
TTCGTCAGCGGCATCCCGCCGACAAGCATCCAGATGCTCTCCAACGTGTCGCTGGCGCCATGGTCGATCATCATCGTCGA
TACCTGGATGTGGACGCCCTACGTGATGCTGATCTGCCTCGCCGGACTGCGCTCCATCCCGGAATACATCTATGAGGCGG
CCGAGGTCGACCGCGCTTCCAACTGGCGGCAATTCTGGTCGATCACCCTGCCGATGGCGCTGCCCTTCATCATGTTGGCG
GTGCTGTTTCGCGGCATCGACAACTTCAAGATGTTCGACATGGTCAATTTGCTCACCGGCGGCGGGCCCGGCTCGACCAC
CGAGGTCGCCTCGATCACGCTGAAGCGGCAAGCTTTCGAGAGCTGGCGCACCGGCTATTCCTCGGCCTTCGCCATCATCC
TGTTCGTGGCGGTGTTCGGGCTCGCCAACATCTACGTCAAGGCGCTGAACAAGGTAAAGCAGAGATGA

Upstream 100 bases:

>100_bases
CCGAGCTAGGCCCAAGCGTCCCGTGCCACCCTTGGCACGGGACGCAGTTCAGATAAATTCCATCACAGAGACGACCCAAG
TGACCGAAGCAGGACTGACC

Downstream 100 bases:

>100_bases
GCCTGACCACTGCCCATTCGGTCGTCGCACCGTCAGCGAATTCGAAGCGCATCGCCGGCGCGATCATCATCGCCTACGCG
CTGATCTCGATCGTGCCGCT

Product: ABC transporter, permease protein

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLNRTAENVARATPEPLARKVRGISDKGLAWLFISPTILLLLAINIFPLFWAIYLSFTNYRANRPNEVVKNLGFANYQRI
LGDHDIWIAMQTTAHFVFWTILLETLIGFTLAWLIDRKFRGHAFWTTLILVPMMLSPAVVGNFWRFLYEPQIGLFSYVIS
FVSGIPPTSIQMLSNVSLAPWSIIIVDTWMWTPYVMLICLAGLRSIPEYIYEAAEVDRASNWRQFWSITLPMALPFIMLA
VLFRGIDNFKMFDMVNLLTGGGPGSTTEVASITLKRQAFESWRTGYSSAFAIILFVAVFGLANIYVKALNKVKQR

Sequences:

>Translated_315_residues
MLNRTAENVARATPEPLARKVRGISDKGLAWLFISPTILLLLAINIFPLFWAIYLSFTNYRANRPNEVVKNLGFANYQRI
LGDHDIWIAMQTTAHFVFWTILLETLIGFTLAWLIDRKFRGHAFWTTLILVPMMLSPAVVGNFWRFLYEPQIGLFSYVIS
FVSGIPPTSIQMLSNVSLAPWSIIIVDTWMWTPYVMLICLAGLRSIPEYIYEAAEVDRASNWRQFWSITLPMALPFIMLA
VLFRGIDNFKMFDMVNLLTGGGPGSTTEVASITLKRQAFESWRTGYSSAFAIILFVAVFGLANIYVKALNKVKQR
>Mature_315_residues
MLNRTAENVARATPEPLARKVRGISDKGLAWLFISPTILLLLAINIFPLFWAIYLSFTNYRANRPNEVVKNLGFANYQRI
LGDHDIWIAMQTTAHFVFWTILLETLIGFTLAWLIDRKFRGHAFWTTLILVPMMLSPAVVGNFWRFLYEPQIGLFSYVIS
FVSGIPPTSIQMLSNVSLAPWSIIIVDTWMWTPYVMLICLAGLRSIPEYIYEAAEVDRASNWRQFWSITLPMALPFIMLA
VLFRGIDNFKMFDMVNLLTGGGPGSTTEVASITLKRQAFESWRTGYSSAFAIILFVAVFGLANIYVKALNKVKQR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=29.296875, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1787570, Length=264, Percent_Identity=26.1363636363636, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789861, Length=270, Percent_Identity=26.2962962962963, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35897; Mature: 35897

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRTAENVARATPEPLARKVRGISDKGLAWLFISPTILLLLAINIFPLFWAIYLSFTNY
CCCCCHHHHHHCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RANRPNEVVKNLGFANYQRILGDHDIWIAMQTTAHFVFWTILLETLIGFTLAWLIDRKFR
CCCCHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHAFWTTLILVPMMLSPAVVGNFWRFLYEPQIGLFSYVISFVSGIPPTSIQMLSNVSLAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
WSIIIVDTWMWTPYVMLICLAGLRSIPEYIYEAAEVDRASNWRQFWSITLPMALPFIMLA
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VLFRGIDNFKMFDMVNLLTGGGPGSTTEVASITLKRQAFESWRTGYSSAFAIILFVAVFG
HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LANIYVKALNKVKQR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNRTAENVARATPEPLARKVRGISDKGLAWLFISPTILLLLAINIFPLFWAIYLSFTNY
CCCCCHHHHHHCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
RANRPNEVVKNLGFANYQRILGDHDIWIAMQTTAHFVFWTILLETLIGFTLAWLIDRKFR
CCCCHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHAFWTTLILVPMMLSPAVVGNFWRFLYEPQIGLFSYVISFVSGIPPTSIQMLSNVSLAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
WSIIIVDTWMWTPYVMLICLAGLRSIPEYIYEAAEVDRASNWRQFWSITLPMALPFIMLA
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VLFRGIDNFKMFDMVNLLTGGGPGSTTEVASITLKRQAFESWRTGYSSAFAIILFVAVFG
HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LANIYVKALNKVKQR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]