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The map label for this gene is ycjP [C]

Identifier: 13474421

GI number: 13474421

Start: 4226864

End: 4227814

Strand: Reverse

Name: ycjP [C]

Synonym: mll5300

Alternate gene names: 13474421

Gene position: 4227814-4226864 (Counterclockwise)

Preceding gene: 13474422

Following gene: 13474420

Centisome position: 60.09

GC content: 63.3

Gene sequence:

>951_bases
ATGAGCCTGACCACTGCCCATTCGGTCGTCGCACCGTCAGCGAATTCGAAGCGCATCGCCGGCGCGATCATCATCGCCTA
CGCGCTGATCTCGATCGTGCCGCTCTTGTGGATCTTCGCCACTAGCTTCAAGACGCCGCCGGACTCGATCGCCTATCCGC
CCAAGATCGTGTTCCAGCCGAGCATCGAAGGCTATTGCAACCTGTTCACGACACGGACGCGGCAGACGCCGGAATACATC
AACTCGCTGGGGCCGGCGACCGGCTTCTGCGACGAGACGGTGCGCAAGCGCAACATGGTGATCGCCGGCCCGTCCAACTT
CCTGCCGCGCTTCCTCAACTCGCTGATCATCGCCTTCGGCTCGACCTTCTGCGCGGTTTTTCTCGGCACGCTGTCGGCCT
ATGGTTTCTCGCGCTTCAAGGTGCCGCTCGCCGACGACCTTCTGTTCTTCATCCTGTCGACGCGCTTCATGCCGCCGATC
GCGGTCGCCATTCCGATCTACCTGATGTACCGCGAGCTTGGCCTGTCGGACACAGCGCTCGGCATGATCCTGCTCTACAC
GGCGGTCAACGTGTCGCTGGCGGTGTGGCTCTTGAAAGGCTTCATCGACGAGATCCCGCGCGAATATGAGGAAGCGGCGA
TGATCGACGGCTACACGCGGCTGCAGGCCTTCTGGCGCACCGTGCTGCCGCAGGCGACGACCGGCATTGCCGCGACCGCG
ATCTTCTGCCTGATCTTCGCCTGGAACGAATATGCCTTCGCGGCACTGCTGACCTCGGGCACGGCGCAGACCGCGCCGCC
CTTCATCCCGACCATCATCGGCGAAGGCGGCCAGGACTGGCCGGCGGTCGCCGCCGGCACGACGATCTTCCTGGTGCCGA
TCCTGGTTTTCACCATCCTGCTTCGCAAGCAATTGCTGCGCGGCATCACATTCGGCGCGGTGCGCAAATGA

Upstream 100 bases:

>100_bases
GGCGCACCGGCTATTCCTCGGCCTTCGCCATCATCCTGTTCGTGGCGGTGTTCGGGCTCGCCAACATCTACGTCAAGGCG
CTGAACAAGGTAAAGCAGAG

Downstream 100 bases:

>100_bases
GCATGACCAAATCAGTCAAACGCAAGTCGCGCTGGCCAGCCTGGGCCCGGCGCGGCCTGATGGAAAACATCGCCACAGTG
CTGATCGCCATCGGCTTCCT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSLTTAHSVVAPSANSKRIAGAIIIAYALISIVPLLWIFATSFKTPPDSIAYPPKIVFQPSIEGYCNLFTTRTRQTPEYI
NSLGPATGFCDETVRKRNMVIAGPSNFLPRFLNSLIIAFGSTFCAVFLGTLSAYGFSRFKVPLADDLLFFILSTRFMPPI
AVAIPIYLMYRELGLSDTALGMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYTRLQAFWRTVLPQATTGIAATA
IFCLIFAWNEYAFAALLTSGTAQTAPPFIPTIIGEGGQDWPAVAAGTTIFLVPILVFTILLRKQLLRGITFGAVRK

Sequences:

>Translated_316_residues
MSLTTAHSVVAPSANSKRIAGAIIIAYALISIVPLLWIFATSFKTPPDSIAYPPKIVFQPSIEGYCNLFTTRTRQTPEYI
NSLGPATGFCDETVRKRNMVIAGPSNFLPRFLNSLIIAFGSTFCAVFLGTLSAYGFSRFKVPLADDLLFFILSTRFMPPI
AVAIPIYLMYRELGLSDTALGMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYTRLQAFWRTVLPQATTGIAATA
IFCLIFAWNEYAFAALLTSGTAQTAPPFIPTIIGEGGQDWPAVAAGTTIFLVPILVFTILLRKQLLRGITFGAVRK
>Mature_315_residues
SLTTAHSVVAPSANSKRIAGAIIIAYALISIVPLLWIFATSFKTPPDSIAYPPKIVFQPSIEGYCNLFTTRTRQTPEYIN
SLGPATGFCDETVRKRNMVIAGPSNFLPRFLNSLIIAFGSTFCAVFLGTLSAYGFSRFKVPLADDLLFFILSTRFMPPIA
VAIPIYLMYRELGLSDTALGMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYTRLQAFWRTVLPQATTGIAATAI
FCLIFAWNEYAFAALLTSGTAQTAPPFIPTIIGEGGQDWPAVAAGTTIFLVPILVFTILLRKQLLRGITFGAVRK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=293, Percent_Identity=26.962457337884, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789860, Length=207, Percent_Identity=29.4685990338164, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1790464, Length=237, Percent_Identity=28.6919831223629, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34576; Mature: 34445

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTTAHSVVAPSANSKRIAGAIIIAYALISIVPLLWIFATSFKTPPDSIAYPPKIVFQP
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
SIEGYCNLFTTRTRQTPEYINSLGPATGFCDETVRKRNMVIAGPSNFLPRFLNSLIIAFG
CCCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHH
STFCAVFLGTLSAYGFSRFKVPLADDLLFFILSTRFMPPIAVAIPIYLMYRELGLSDTAL
HHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
GMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYTRLQAFWRTVLPQATTGIAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IFCLIFAWNEYAFAALLTSGTAQTAPPFIPTIIGEGGQDWPAVAAGTTIFLVPILVFTIL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHH
LRKQLLRGITFGAVRK
HHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SLTTAHSVVAPSANSKRIAGAIIIAYALISIVPLLWIFATSFKTPPDSIAYPPKIVFQP
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
SIEGYCNLFTTRTRQTPEYINSLGPATGFCDETVRKRNMVIAGPSNFLPRFLNSLIIAFG
CCCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHH
STFCAVFLGTLSAYGFSRFKVPLADDLLFFILSTRFMPPIAVAIPIYLMYRELGLSDTAL
HHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
GMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMIDGYTRLQAFWRTVLPQATTGIAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IFCLIFAWNEYAFAALLTSGTAQTAPPFIPTIIGEGGQDWPAVAAGTTIFLVPILVFTIL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHH
LRKQLLRGITFGAVRK
HHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]