| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474394
Identifier: 13474394
GI number: 13474394
Start: 4199016
End: 4200038
Strand: Reverse
Name: 13474394
Synonym: mll5269
Alternate gene names: NA
Gene position: 4200038-4199016 (Counterclockwise)
Preceding gene: 13474395
Following gene: 13474385
Centisome position: 59.69
GC content: 64.52
Gene sequence:
>1023_bases ATGCACTACCGATCGATCTCCGACATGAACGACACCATCGTCGGCAACCTTCACCGGCTGCCGTGCGACATCGACCTGGT GGTCGGCGTCCCCAGAAGCGGCGTGCTGGCGGCGACGCTGGTCAGCCTTGCGGCGAACATTCCGATGACCGATCTGGATT CCTTCCTGGAGGGCCGGGTCTATACGTCAGGCATCACCAAGCGCCGCGCCGCGCTCGACCGTAAGGTCTCGGACATGCGC AAGGTGCTGGTGATCGACGACAGCATCGCCGGCGGCAACGCCATGCGCGATGCCCGTGCCCGAATCGAGGCTGCCGGGAT CGAGGGTGATTTCATCTATGCCGCGGTGTTCGGCCTGCAGGCGCAGCATCCGGAAACCGACGTCGTCTTCGAGGTCGTGC TGCATCCGCGCATGTTCCAGTGGAACTTCATGCACCACAAATTCCTGGCGCAATGCTGCGTCGACATTGACGGCGTGCTG TGCCTCGATCCGACCGAGGCGGAAAACGACGATGGTCCGGCCTATGAGAAATTCCTTAGCGAAGCGCGGCCGCTTCATGC CCCGACCCACAGGATCGGCTGGCTGGTCACCAGCCGGCTGGAGAAATACCGCGCTCTGACCGAGGCGTGGCTGGCCAAGA ACGGGATCCTGTACGACCAACTGATCATGCTCGACCTGCCGAGCAAGGCGGAGCGCCAGCGGCTCGGCGCGCATGGCAGT TTCAAGGCCGATTTCTACCGCAAATCCAACGCCATCCTGTTCATCGAAAGCGAGCATGCACAGGCGCTGAAGATCACGGA GCTGTCGGGCAAGCCGGTGCTGTGCGTCGAAACACACATGGTGAGCTTCCCCGATGCGCTGTCGCTGCCGGCGCTCGGCC AAGCGGCGCGCAACCTGCCAGCCAGGCTGCGGCAGATCAACTCGCAGCAAGGCCGCAAGGGCGCCGCCAAGGCCCTGGCC CGCGCCCTGCTCGGCGCCCGCGGCTACGAGACGCTGAAAAGCCGGGTCAAGCGCCCGGCCTGA
Upstream 100 bases:
>100_bases TGCTGCCGGCAAGACAGCCGGCGGCAACGCCCCGCGAGGCGCAATAATTTTGGCGCCTTTGCCGGCTACCCAATATCCAC ACGAACATCAGGTCTGATCC
Downstream 100 bases:
>100_bases TCGGCTGCCTTGCTGGGCGCTGGCTACGCCGCCTGGCGCGCGCGCTGCTGCACGGCCCTGTCCAGTATCGAGAAGAAGGT GACGAACTGGCGATCGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MHYRSISDMNDTIVGNLHRLPCDIDLVVGVPRSGVLAATLVSLAANIPMTDLDSFLEGRVYTSGITKRRAALDRKVSDMR KVLVIDDSIAGGNAMRDARARIEAAGIEGDFIYAAVFGLQAQHPETDVVFEVVLHPRMFQWNFMHHKFLAQCCVDIDGVL CLDPTEAENDDGPAYEKFLSEARPLHAPTHRIGWLVTSRLEKYRALTEAWLAKNGILYDQLIMLDLPSKAERQRLGAHGS FKADFYRKSNAILFIESEHAQALKITELSGKPVLCVETHMVSFPDALSLPALGQAARNLPARLRQINSQQGRKGAAKALA RALLGARGYETLKSRVKRPA
Sequences:
>Translated_340_residues MHYRSISDMNDTIVGNLHRLPCDIDLVVGVPRSGVLAATLVSLAANIPMTDLDSFLEGRVYTSGITKRRAALDRKVSDMR KVLVIDDSIAGGNAMRDARARIEAAGIEGDFIYAAVFGLQAQHPETDVVFEVVLHPRMFQWNFMHHKFLAQCCVDIDGVL CLDPTEAENDDGPAYEKFLSEARPLHAPTHRIGWLVTSRLEKYRALTEAWLAKNGILYDQLIMLDLPSKAERQRLGAHGS FKADFYRKSNAILFIESEHAQALKITELSGKPVLCVETHMVSFPDALSLPALGQAARNLPARLRQINSQQGRKGAAKALA RALLGARGYETLKSRVKRPA >Mature_340_residues MHYRSISDMNDTIVGNLHRLPCDIDLVVGVPRSGVLAATLVSLAANIPMTDLDSFLEGRVYTSGITKRRAALDRKVSDMR KVLVIDDSIAGGNAMRDARARIEAAGIEGDFIYAAVFGLQAQHPETDVVFEVVLHPRMFQWNFMHHKFLAQCCVDIDGVL CLDPTEAENDDGPAYEKFLSEARPLHAPTHRIGWLVTSRLEKYRALTEAWLAKNGILYDQLIMLDLPSKAERQRLGAHGS FKADFYRKSNAILFIESEHAQALKITELSGKPVLCVETHMVSFPDALSLPALGQAARNLPARLRQINSQQGRKGAAKALA RALLGARGYETLKSRVKRPA
Specific function: Unknown
COG id: COG5663
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37625; Mature: 37625
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRSISDMNDTIVGNLHRLPCDIDLVVGVPRSGVLAATLVSLAANIPMTDLDSFLEGRV CCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCE YTSGITKRRAALDRKVSDMRKVLVIDDSIAGGNAMRDARARIEAAGIEGDFIYAAVFGLQ EECCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC AQHPETDVVFEVVLHPRMFQWNFMHHKFLAQCCVDIDGVLCLDPTEAENDDGPAYEKFLS CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHH EARPLHAPTHRIGWLVTSRLEKYRALTEAWLAKNGILYDQLIMLDLPSKAERQRLGAHGS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCC FKADFYRKSNAILFIESEHAQALKITELSGKPVLCVETHMVSFPDALSLPALGQAARNLP CCHHEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCHHHHHHHHHH ARLRQINSQQGRKGAAKALARALLGARGYETLKSRVKRPA HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure MHYRSISDMNDTIVGNLHRLPCDIDLVVGVPRSGVLAATLVSLAANIPMTDLDSFLEGRV CCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCE YTSGITKRRAALDRKVSDMRKVLVIDDSIAGGNAMRDARARIEAAGIEGDFIYAAVFGLQ EECCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC AQHPETDVVFEVVLHPRMFQWNFMHHKFLAQCCVDIDGVLCLDPTEAENDDGPAYEKFLS CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHH EARPLHAPTHRIGWLVTSRLEKYRALTEAWLAKNGILYDQLIMLDLPSKAERQRLGAHGS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCC FKADFYRKSNAILFIESEHAQALKITELSGKPVLCVETHMVSFPDALSLPALGQAARNLP CCHHEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCHHHHHHHHHH ARLRQINSQQGRKGAAKALARALLGARGYETLKSRVKRPA HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA