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The map label for this gene is occM [H]

Identifier: 13474335

GI number: 13474335

Start: 4132693

End: 4133385

Strand: Reverse

Name: occM [H]

Synonym: mll5199

Alternate gene names: 13474335

Gene position: 4133385-4132693 (Counterclockwise)

Preceding gene: 13474336

Following gene: 13474334

Centisome position: 58.75

GC content: 64.94

Gene sequence:

>693_bases
ATGCGATGGAACTGGCTGCCGCAATATTGGGAAATGGGCCTGATGGGCATCTGGCGGGCCCTGTGGATCCTGGCCGTCAC
CTGCGCGCTCGGCTTCCTGATCGCCGTGCCGGTCGGGCTGGCGCAGGCCGCCGGTTCGATCTGGGTCGCGGCGCCGGCGA
AAGTTTTCTGCACCATCATCCGCGGCACGCCGCTGCTCTTGCAGCTGTGGCTGCTCTATTACGGGCTGGGCTCGCTGTTC
CCGCAATATCCATGGATCCGCGAGTCCTGGATGTGGCCCTATCTGAGGCAGGCATGGCCGTACGGCGTTCTGGCTCTCAC
CCTGTCCTTCGCCGGTTACGAGGGCGAAGTGATGCGCGGCGCCTTTGCCGGCGTGCCCCAGGGACAGCTGGAAGCCGCCC
GCGCCTTCGGCATGAGCCGCTGGAAGATTTTCCAGCGCATCTTGCTGCCGCAGGCCTTCTACCGGGCTCTGCCGACGCTG
ACCGGCGAGACCGTGCTGCAATTGAAGTCGACGCCGCTGGTGGCGACGATCAGCGTCATCGATATCTTCGCCGTTGCGGG
CAAGGTGCGGCAGGACACCTACCTCACCTACGAGCCCTTGCTGCTGCTGGCGTTGATCTATATGGCGATCACCGGCATTC
TGGTCCTGGCCCTCAGCCGGATCGAGGCGCGGATTCCGGTCAAGGTCGGCTAG

Upstream 100 bases:

>100_bases
CATCATCAACACCGCGGCGCGCGCCTCGCTCTGGCTGCAGCCGCACCGCATCGTCCTCATCCTGATCGCCCTGGGGCTGG
TGCTGTCGGCCGCCTTTTTC

Downstream 100 bases:

>100_bases
GAAGAGGTCGTTAGCGAACGGTGAGTAGCGAATAGGGCGTCTCACTATTCGCCCTACTCGCTATTCCCTATTCGCTACTC
ACTTAGGAACAATTGCGATG

Product: ABC transporter, permease protein

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRWNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAAGSIWVAAPAKVFCTIIRGTPLLLQLWLLYYGLGSLF
PQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTL
TGETVLQLKSTPLVATISVIDIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVKVG

Sequences:

>Translated_230_residues
MRWNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAAGSIWVAAPAKVFCTIIRGTPLLLQLWLLYYGLGSLF
PQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTL
TGETVLQLKSTPLVATISVIDIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVKVG
>Mature_230_residues
MRWNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAAGSIWVAAPAKVFCTIIRGTPLLLQLWLLYYGLGSLF
PQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTL
TGETVLQLKSTPLVATISVIDIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVKVG

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788645, Length=223, Percent_Identity=31.8385650224215, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787086, Length=172, Percent_Identity=34.8837209302326, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788226, Length=173, Percent_Identity=32.3699421965318, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=29.1866028708134, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787087, Length=192, Percent_Identity=32.8125, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788646, Length=204, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786874, Length=209, Percent_Identity=25.3588516746411, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786873, Length=123, Percent_Identity=28.4552845528455, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25811; Mature: 25811

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAAGSIWVAAPAKVFCTII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
RGTPLLLQLWLLYYGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRG
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHH
AFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTLTGETVLQLKSTPLVATISVI
HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHH
DIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVKVG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRWNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAAGSIWVAAPAKVFCTII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
RGTPLLLQLWLLYYGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRG
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHH
AFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTLTGETVLQLKSTPLVATISVI
HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHH
DIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVKVG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]