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The map label for this gene is 13474312

Identifier: 13474312

GI number: 13474312

Start: 4103736

End: 4104320

Strand: Reverse

Name: 13474312

Synonym: mll5171

Alternate gene names: NA

Gene position: 4104320-4103736 (Counterclockwise)

Preceding gene: 13474313

Following gene: 13474311

Centisome position: 58.33

GC content: 58.63

Gene sequence:

>585_bases
ATGCAAGGGCCGCTCGCTCTGTCACGAGGCATCGACCGCCTCAACGAATTCATCGGCAAATCGGTAGCCTGGCTGATCCT
GCTGGCGATCCTGGTGAGCGCGGCCAACGCCGTCATCCGCAAGATCTTCGACATTTCGTCGAATGCCTGGCTGGAGCTGC
AATGGTATTTGTTCGGCGCCGCCTTCATGCTGGCCGCCGCCTATACGCTGAAGCAGAACGAGCATATCCGCATCGACATC
GTCTACGGCCTGTTTTCCCGCCGCGTACAGCACTGGATCGACCTTCTCGGCCATCTCCTGTTCCTGATGCCGTTCGTGAC
GCTGATGGTCATCTATTTCGTGCCCTACGTGTCGCTGTCGTTCCGCAGCGGCGAGATGTCCAACAATTCCGGTGGTCTCA
TCATCTGGCCGGCCAAGGCCATCCTGCTGGTCGGTTTTTTCCTGCTCGCGCTGCAGGGCATCTCCGAAATCATCAAGAAG
ATCGCCATCATGCGCGGCGACATGGACGACCCCAATCCGTTCATATCGGCACATGAGCAAGCCGAACTCGAAGCCAAGGC
ATTGGCCGACGAGGTGCGCTCATGA

Upstream 100 bases:

>100_bases
CCATGCGTGTTGACCCGTCCGGCCACGCACGGCATACCGTTGGGCCACGCGGCGTGACGGCAGGGGGAACCGGCACGCCT
CCGCTACAAGGGAGGACTGC

Downstream 100 bases:

>100_bases
TGGAATTCATCGCCCAGAACATGGCGCCGATCATGTTCGCCTCGCTGATCATCTTCCTGCTGATTGGCTACCCCGTGGCC
TTCTCGCTGGCCGCCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Mannitol Transporter; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; TRAP-Type Transport System Small Permease Component; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQGPLALSRGIDRLNEFIGKSVAWLILLAILVSAANAVIRKIFDISSNAWLELQWYLFGAAFMLAAAYTLKQNEHIRIDI
VYGLFSRRVQHWIDLLGHLLFLMPFVTLMVIYFVPYVSLSFRSGEMSNNSGGLIIWPAKAILLVGFFLLALQGISEIIKK
IAIMRGDMDDPNPFISAHEQAELEAKALADEVRS

Sequences:

>Translated_194_residues
MQGPLALSRGIDRLNEFIGKSVAWLILLAILVSAANAVIRKIFDISSNAWLELQWYLFGAAFMLAAAYTLKQNEHIRIDI
VYGLFSRRVQHWIDLLGHLLFLMPFVTLMVIYFVPYVSLSFRSGEMSNNSGGLIIWPAKAILLVGFFLLALQGISEIIKK
IAIMRGDMDDPNPFISAHEQAELEAKALADEVRS
>Mature_194_residues
MQGPLALSRGIDRLNEFIGKSVAWLILLAILVSAANAVIRKIFDISSNAWLELQWYLFGAAFMLAAAYTLKQNEHIRIDI
VYGLFSRRVQHWIDLLGHLLFLMPFVTLMVIYFVPYVSLSFRSGEMSNNSGGLIIWPAKAILLVGFFLLALQGISEIIKK
IAIMRGDMDDPNPFISAHEQAELEAKALADEVRS

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21768; Mature: 21768

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGPLALSRGIDRLNEFIGKSVAWLILLAILVSAANAVIRKIFDISSNAWLELQWYLFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
AFMLAAAYTLKQNEHIRIDIVYGLFSRRVQHWIDLLGHLLFLMPFVTLMVIYFVPYVSLS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FRSGEMSNNSGGLIIWPAKAILLVGFFLLALQGISEIIKKIAIMRGDMDDPNPFISAHEQ
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHH
AELEAKALADEVRS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MQGPLALSRGIDRLNEFIGKSVAWLILLAILVSAANAVIRKIFDISSNAWLELQWYLFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
AFMLAAAYTLKQNEHIRIDIVYGLFSRRVQHWIDLLGHLLFLMPFVTLMVIYFVPYVSLS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FRSGEMSNNSGGLIIWPAKAILLVGFFLLALQGISEIIKKIAIMRGDMDDPNPFISAHEQ
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHH
AELEAKALADEVRS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA