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The map label for this gene is yedU [C]

Identifier: 13473796

GI number: 13473796

Start: 3586834

End: 3587604

Strand: Direct

Name: yedU [C]

Synonym: mlr4512

Alternate gene names: 13473796

Gene position: 3586834-3587604 (Clockwise)

Preceding gene: 13473794

Following gene: 13473799

Centisome position: 50.98

GC content: 66.41

Gene sequence:

>771_bases
ATGAGTGTCAGGGATGCCAATCCGGTCAATGCACGCAAGCCCAAGCGTGTGGCCATCGTCATCGCCAATCCGGCCGTATC
GACCACGACAGGATGGCCGGTCGGCTTCTGGTGGAGCGAACTGACCCATCCCTGGTTCGCCTTCACCGAGCGCGGCTACG
CGGTGGAAATCTTCTCGCCCGAGGGCGGCAGATGCGAGGCCGACGCGCTGAGCGACCCGCGCGATCCCTCGGGTTATTCG
GAGACCGACCTCATCTCGCTCGGCTTCCTGTCGAGCCCGAAACTGGCGGCTCTGGTCGAGGCCACGCGGCCGGCGGCGGA
GATCGATGTCGACAGCTTTGACGCGATTGTGGTCGCCGGCGGCCAGGCGCCGATGTTCAGCTACGATCGCGCCGAAACAC
TGCAGCGAACCTTCGTCGCCTTCCACGAAGCCGGCAAGGTGGCCGCCGCGCTCTGCCACGGCACCGCGTTGCTGCGCTAC
GCCAGGCGAGCCGATGGAGCGCTGCTTGCCGCCGGCAAGACGGTGACGGGTTTCGCCAATGCCGAGGAGGATTTCGCCGA
CAAGGCGACCTGGGAGATGGGCGCGCTCGCGCGCGGCAAACATCTGATGCCCTGGCGCATTGAGGACGAGTTGAAGGCGA
TCGGCGCCAATTATGTCCAGGCCGGGCTGTGGCGCGGCTTTGCCGTGCGCGACGGCAATCTGATCACCGGCCAGCAGAAT
TTTTCCGGCGCCGAAACCGCGCGCCTGGTCTGTGAGGCGCTGGGCGGCTGA

Upstream 100 bases:

>100_bases
AGGCAAGGCCCTGCAGAGACGGAAGCGGATTTTGCCCCGCCATGTGGCCAGATTGCCGGGCCCGGCTTTGTCGGCGACAG
TTTCAAAAGGGAGAGCGAAG

Downstream 100 bases:

>100_bases
GCGCCAGCCGGCATTTACCCCAGCAACTGCTTGCTCAGCCGCGCGCACTGGACGCGGATGTCGGGTATGGCGTCGATCTC
GAAGAAGGTGCCGCGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase/Amidase; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSVRDANPVNARKPKRVAIVIANPAVSTTTGWPVGFWWSELTHPWFAFTERGYAVEIFSPEGGRCEADALSDPRDPSGYS
ETDLISLGFLSSPKLAALVEATRPAAEIDVDSFDAIVVAGGQAPMFSYDRAETLQRTFVAFHEAGKVAAALCHGTALLRY
ARRADGALLAAGKTVTGFANAEEDFADKATWEMGALARGKHLMPWRIEDELKAIGANYVQAGLWRGFAVRDGNLITGQQN
FSGAETARLVCEALGG

Sequences:

>Translated_256_residues
MSVRDANPVNARKPKRVAIVIANPAVSTTTGWPVGFWWSELTHPWFAFTERGYAVEIFSPEGGRCEADALSDPRDPSGYS
ETDLISLGFLSSPKLAALVEATRPAAEIDVDSFDAIVVAGGQAPMFSYDRAETLQRTFVAFHEAGKVAAALCHGTALLRY
ARRADGALLAAGKTVTGFANAEEDFADKATWEMGALARGKHLMPWRIEDELKAIGANYVQAGLWRGFAVRDGNLITGQQN
FSGAETARLVCEALGG
>Mature_255_residues
SVRDANPVNARKPKRVAIVIANPAVSTTTGWPVGFWWSELTHPWFAFTERGYAVEIFSPEGGRCEADALSDPRDPSGYSE
TDLISLGFLSSPKLAALVEATRPAAEIDVDSFDAIVVAGGQAPMFSYDRAETLQRTFVAFHEAGKVAAALCHGTALLRYA
RRADGALLAAGKTVTGFANAEEDFADKATWEMGALARGKHLMPWRIEDELKAIGANYVQAGLWRGFAVRDGNLITGQQNF
SGAETARLVCEALGG

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=245, Percent_Identity=27.7551020408163, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27495; Mature: 27364

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRDANPVNARKPKRVAIVIANPAVSTTTGWPVGFWWSELTHPWFAFTERGYAVEIFSP
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCEEEEEECC
EGGRCEADALSDPRDPSGYSETDLISLGFLSSPKLAALVEATRPAAEIDVDSFDAIVVAG
CCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEC
GQAPMFSYDRAETLQRTFVAFHEAGKVAAALCHGTALLRYARRADGALLAAGKTVTGFAN
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCC
AEEDFADKATWEMGALARGKHLMPWRIEDELKAIGANYVQAGLWRGFAVRDGNLITGQQN
CCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCC
FSGAETARLVCEALGG
CCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SVRDANPVNARKPKRVAIVIANPAVSTTTGWPVGFWWSELTHPWFAFTERGYAVEIFSP
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCEEEEEECC
EGGRCEADALSDPRDPSGYSETDLISLGFLSSPKLAALVEATRPAAEIDVDSFDAIVVAG
CCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEC
GQAPMFSYDRAETLQRTFVAFHEAGKVAAALCHGTALLRYARRADGALLAAGKTVTGFAN
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCC
AEEDFADKATWEMGALARGKHLMPWRIEDELKAIGANYVQAGLWRGFAVRDGNLITGQQN
CCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCC
FSGAETARLVCEALGG
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA