| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is ytfH [C]
Identifier: 13473795
GI number: 13473795
Start: 3586369
End: 3586722
Strand: Reverse
Name: ytfH [C]
Synonym: mll4511
Alternate gene names: 13473795
Gene position: 3586722-3586369 (Counterclockwise)
Preceding gene: 13473797
Following gene: 13473792
Centisome position: 50.98
GC content: 65.82
Gene sequence:
>354_bases ATGACACAACGCGGTAGACTCTATGGCTGCCCGGTCGAGTTCGCGCTCGACGCGCTCGGCGGCAAATGGAAAACGGTGAT CATCGCGCGGATCAAGCAAGGACCGCTGCGCTATTCCGAGCTGCGGCGAATGATCCCGTCGCTCTCCGACAAGATGCTGA CGCAGCGGCTCGCCGATCTCGTCGAGATCGGCTTCGTCGTGCTCGAGACGTCGCCCGACGGCAAGGGGCGCTACGCCTTG ACCGAGCGCGGCCAGGATCTCGCCGCAGCACTACAGGCGCTCTATGACTGGGGCAGCGTGCATGGCCGCGCCGAGGGCGT GCGCTTCCGCAGTGATATCGAGGCGGCGGCCTAG
Upstream 100 bases:
>100_bases CTTTTGAAACTGTCGCCGACAAAGCCGGGCCCGGCAATCTGGCCACATGGCGGGGCAAAATCCGCTTCCGTCTCTGCAGG GCCTTGCCTAGGATCGGTGC
Downstream 100 bases:
>100_bases CAACTTTCGTCCCTCAGGCCGCGCCGGCAAGCGCGCCGCAAAAGCCGGCGACATCGGTGATGACGGCCTCGCCGAGGAAA CGCAGCGTCGCCATCGAGCG
Product: cinnamoyl ester hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTQRGRLYGCPVEFALDALGGKWKTVIIARIKQGPLRYSELRRMIPSLSDKMLTQRLADLVEIGFVVLETSPDGKGRYAL TERGQDLAAALQALYDWGSVHGRAEGVRFRSDIEAAA
Sequences:
>Translated_117_residues MTQRGRLYGCPVEFALDALGGKWKTVIIARIKQGPLRYSELRRMIPSLSDKMLTQRLADLVEIGFVVLETSPDGKGRYAL TERGQDLAAALQALYDWGSVHGRAEGVRFRSDIEAAA >Mature_116_residues TQRGRLYGCPVEFALDALGGKWKTVIIARIKQGPLRYSELRRMIPSLSDKMLTQRLADLVEIGFVVLETSPDGKGRYALT ERGQDLAAALQALYDWGSVHGRAEGVRFRSDIEAAA
Specific function: Unknown
COG id: COG1733
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002577 - InterPro: IPR011991 [H]
Pfam domain/function: PF01638 DUF24 [H]
EC number: NA
Molecular weight: Translated: 12966; Mature: 12835
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS51118 HTH_HXLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRGRLYGCPVEFALDALGGKWKTVIIARIKQGPLRYSELRRMIPSLSDKMLTQRLADL CCCCCCEECCHHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VEIGFVVLETSPDGKGRYALTERGQDLAAALQALYDWGSVHGRAEGVRFRSDIEAAA HHHCEEEEECCCCCCCCEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCC >Mature Secondary Structure TQRGRLYGCPVEFALDALGGKWKTVIIARIKQGPLRYSELRRMIPSLSDKMLTQRLADL CCCCCEECCHHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VEIGFVVLETSPDGKGRYALTERGQDLAAALQALYDWGSVHGRAEGVRFRSDIEAAA HHHCEEEEECCCCCCCCEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]