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The map label for this gene is ycdL [C]

Identifier: 13473794

GI number: 13473794

Start: 3585708

End: 3586355

Strand: Direct

Name: ycdL [C]

Synonym: mlr4509

Alternate gene names: 13473794

Gene position: 3585708-3586355 (Clockwise)

Preceding gene: 13473793

Following gene: 13473796

Centisome position: 50.96

GC content: 68.21

Gene sequence:

>648_bases
ATGATCCGGTCGAGCGAAGGCATCGAGATCCCCACGAGTCTGGTCGAGTGGTGCGATCCGCACCGCATGGCGCTGGTGGT
CTACGACATGCAAATCGGCATCTGCCGCCAGGTCGCCGGCGCGGCCGATATCGTCGAGCGCACCGGCATCGTGCTCGAAG
CCGCCCGCTCGGCCGGCATGCGGTTGGCGTTCACCCGCCACCTCTCCTTGCCGCGCAAATGGATGGGCGCCACCCAGCTG
CGCACCGCCATGGCCTGGCAGCGGCGCGACAGTCCCGACGCGGTCGAGCCGTGGTTTTTGCGCGACGCCGACGCGACGCG
GATCATCCCCGAACTGGCGCCCCGCGCCGACGAAGCCGTGTTCGACAAGCTGACCATGTCGGCCTTCGATTCCACCGCTC
TGAGCTTCGCCTTGCGCGATTGCGGCGTGCGCGCCATCGCCCTTGCCGGCATCGCCATGGAGATCGGCATCGAGCCGACA
GTTCGCCAGGCGACCGACAATGGTTTTACGGCTGTGGTGATCGAGGATGCCTGCGGCTTCGGCAACCGCGAAGCGCGCGA
CCGCTCGATGGCGACGCTGCGTTTCCTCGGCGAGGCCGTCATCACCGATGTCGCCGGCTTTTGCGGCGCGCTTGCCGGCG
CGGCCTGA

Upstream 100 bases:

>100_bases
TCGAATGGCATTTCCTCGCCTTCGACCCGGCACCCTTGCCGCTCGAATATCTGTTCGACCCCGGCGTCGACATCGCCCAA
CCCTGGGACCGGACGGCGGC

Downstream 100 bases:

>100_bases
GGGACGAAAGTTGCTAGGCCGCCGCCTCGATATCACTGCGGAAGCGCACGCCCTCGGCGCGGCCATGCACGCTGCCCCAG
TCATAGAGCGCCTGTAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase; Nicotinamidase-Like Amidase; Cysteine Hydrolase Falmily Protein; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIRSSEGIEIPTSLVEWCDPHRMALVVYDMQIGICRQVAGAADIVERTGIVLEAARSAGMRLAFTRHLSLPRKWMGATQL
RTAMAWQRRDSPDAVEPWFLRDADATRIIPELAPRADEAVFDKLTMSAFDSTALSFALRDCGVRAIALAGIAMEIGIEPT
VRQATDNGFTAVVIEDACGFGNREARDRSMATLRFLGEAVITDVAGFCGALAGAA

Sequences:

>Translated_215_residues
MIRSSEGIEIPTSLVEWCDPHRMALVVYDMQIGICRQVAGAADIVERTGIVLEAARSAGMRLAFTRHLSLPRKWMGATQL
RTAMAWQRRDSPDAVEPWFLRDADATRIIPELAPRADEAVFDKLTMSAFDSTALSFALRDCGVRAIALAGIAMEIGIEPT
VRQATDNGFTAVVIEDACGFGNREARDRSMATLRFLGEAVITDVAGFCGALAGAA
>Mature_215_residues
MIRSSEGIEIPTSLVEWCDPHRMALVVYDMQIGICRQVAGAADIVERTGIVLEAARSAGMRLAFTRHLSLPRKWMGATQL
RTAMAWQRRDSPDAVEPWFLRDADATRIIPELAPRADEAVFDKLTMSAFDSTALSFALRDCGVRAIALAGIAMEIGIEPT
VRQATDNGFTAVVIEDACGFGNREARDRSMATLRFLGEAVITDVAGFCGALAGAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23290; Mature: 23290

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSSEGIEIPTSLVEWCDPHRMALVVYDMQIGICRQVAGAADIVERTGIVLEAARSAGM
CCCCCCCCCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLAFTRHLSLPRKWMGATQLRTAMAWQRRDSPDAVEPWFLRDADATRIIPELAPRADEAV
EEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHH
FDKLTMSAFDSTALSFALRDCGVRAIALAGIAMEIGIEPTVRQATDNGFTAVVIEDACGF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCC
GNREARDRSMATLRFLGEAVITDVAGFCGALAGAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSSEGIEIPTSLVEWCDPHRMALVVYDMQIGICRQVAGAADIVERTGIVLEAARSAGM
CCCCCCCCCCCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLAFTRHLSLPRKWMGATQLRTAMAWQRRDSPDAVEPWFLRDADATRIIPELAPRADEAV
EEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHH
FDKLTMSAFDSTALSFALRDCGVRAIALAGIAMEIGIEPTVRQATDNGFTAVVIEDACGF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCC
GNREARDRSMATLRFLGEAVITDVAGFCGALAGAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA