| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473792
Identifier: 13473792
GI number: 13473792
Start: 3584812
End: 3585210
Strand: Reverse
Name: 13473792
Synonym: mll4506
Alternate gene names: NA
Gene position: 3585210-3584812 (Counterclockwise)
Preceding gene: 13473795
Following gene: 13473791
Centisome position: 50.95
GC content: 69.17
Gene sequence:
>399_bases ATGGGTATCGAGCGGCTGAACCCGAAGGGCATGCACAGCAACCCGGCCTATTCGCAAGGCGTGGCGCTGCCCGCCTCGGC GCGCATCGTGCTGATCGGCGGCCAGAACGGCATCGACGCCGATGGCCGGATCGTCGGCAAGGGCGACATCGCGGCGCAGA CCAGGCAGGCGCTCGCCAATCTGGCGATGGTGCTCGATGCCGGCGGCGCCAGGCCGGAGGATCTCGTCCGCCTGTCGATC TACATTGTCGGCGACGCCGACATCAGGCCGGCCTTCGGCGCCTGGATGGCGTTCTGGGCGGACCGCGGGCCGCCGCCGGT GGTGACAGGCATACGCGTGCTCGGCCTCGCCAATCCGGATTTCCTGATCGAGATCGAAGGCCAGGCCGCCGTCGTGTAG
Upstream 100 bases:
>100_bases GCATGTCGAAAATGGCGGCTTCAACGAACGAGATGGTTCGTTGAACGAGATGGCCGACTGGCCTTTCGTGGCGCGTGGCA TCCAGCGGAGAGGAGACGGA
Downstream 100 bases:
>100_bases AAGCCCCGCTTTGGGTGCCATGGCGGATGAGCAGCTGCCGGTTGGAATTTCATTCCTCGTCTGGCCGGCTGATTGGCACG TTCTATCTTCTTTCCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyrimidine Utilization Protein C; Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translational Inhibitor Protein; Translation Initiation Inhibitor; Endoribonuclease Inhibits Protein Synthesis; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily Protein
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGIERLNPKGMHSNPAYSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALANLAMVLDAGGARPEDLVRLSI YIVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPDFLIEIEGQAAVV
Sequences:
>Translated_132_residues MGIERLNPKGMHSNPAYSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALANLAMVLDAGGARPEDLVRLSI YIVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPDFLIEIEGQAAVV >Mature_131_residues GIERLNPKGMHSNPAYSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALANLAMVLDAGGARPEDLVRLSIY IVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPDFLIEIEGQAAVV
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13755; Mature: 13624
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIERLNPKGMHSNPAYSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALAN CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHH LAMVLDAGGARPEDLVRLSIYIVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPD HHHEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCC FLIEIEGQAAVV EEEEECCCEECC >Mature Secondary Structure GIERLNPKGMHSNPAYSQGVALPASARIVLIGGQNGIDADGRIVGKGDIAAQTRQALAN CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHH LAMVLDAGGARPEDLVRLSIYIVGDADIRPAFGAWMAFWADRGPPPVVTGIRVLGLANPD HHHEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCC FLIEIEGQAAVV EEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA