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The map label for this gene is ydiA [C]

Identifier: 13473781

GI number: 13473781

Start: 3572980

End: 3573801

Strand: Direct

Name: ydiA [C]

Synonym: mlr4488

Alternate gene names: 13473781

Gene position: 3572980-3573801 (Clockwise)

Preceding gene: 13473777

Following gene: 13473782

Centisome position: 50.78

GC content: 64.23

Gene sequence:

>822_bases
GTGAACAAACCCCAGAGCTTCTTTCACCTGCACCTGATTTCCGACGCGACCGGCGAAACGCTGCTCGCCGCCGGCCGGGC
GGCTTCGGCGCAATACAAGGACGCGCGGGCGATTGAACATATCTACCCGCTCATCCGCACCGAAAAGCAGGTGGCCAAGG
TGTTCGAGGACATCGAGGAGGAGCCGGGCATCATTCTCTACACGGTCGTCGACCAGAAGCTGGCGCGCGGCATCGACGAA
CGCTGCGCCACAATGGGCCTGCCTTGTGTGTCGGTGCTGGAGCCGGTGCTCACCGTCTTCCAGTCCTATCTCGGCACGCC
GGCCGGCCGCCGCGTCGGCGCCCAGCACGTTCTCGACGCCGAATATTTCCGCCGCATCGATGCGCTGAACTTCACCATGG
ACCATGATGACGGCCAGTTGCCGGCCAATATGGACGATGCCGATGTCGTGCTGATCGGCATTTCGCGGACCTCGAAGACG
CCGACCAGCATCTATCTCGCCAATCGCGGCATCAAGACCGCCAACATCCCGATCGTGCTCGGCGTGCCGGTGCCGGAAAG
CCTGGTCAGCGCCTCCAAGCCGCTGATCGTCGGGCTGATCGCCACCGCCGAGCGCATCTCGCATGTCCGCCAGAACCGCA
TCCTCGGCAACAGCAGCTCCTACGTGCCGACCGACTATGTCGACCGCGCCGCCATCAACGAGGAGCTCGCCTACGCCCGT
CAGATCTGCACGCGCCATGGCTGGCCGATGATCGACGTCAGCCGCCGCTCGATCGAGGAAACGGCCGCGGCGATCGTTGC
CCTGCGGGGGAAGAACAGATAA

Upstream 100 bases:

>100_bases
CGAATTGTGGACAAACTGCCATCTGATACAGTCGCCTCTGGCCGGCCCGTCTTTCTGTCCCGCTTTATCCACATCCGCCC
ACAGCCCCAGGTGATCCCCT

Downstream 100 bases:

>100_bases
TTGGAGCCGGGCTGCGCGTCGCCAACACCCACCGTCGCGAGGCATGTACGTCACGGCATGGATCCTAGGGTCTGCGCCGC
GTCGCTGCGCTCCTTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEEEPGIILYTVVDQKLARGIDE
RCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDAEYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKT
PTSIYLANRGIKTANIPIVLGVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYAR
QICTRHGWPMIDVSRRSIEETAAAIVALRGKNR

Sequences:

>Translated_273_residues
MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEEEPGIILYTVVDQKLARGIDE
RCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDAEYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKT
PTSIYLANRGIKTANIPIVLGVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYAR
QICTRHGWPMIDVSRRSIEETAAAIVALRGKNR
>Mature_273_residues
MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEEEPGIILYTVVDQKLARGIDE
RCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDAEYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKT
PTSIYLANRGIKTANIPIVLGVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYAR
QICTRHGWPMIDVSRRSIEETAAAIVALRGKNR

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=287, Percent_Identity=28.9198606271777, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4488_RHILO (Q98DY5)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105349.1
- GeneID:   1228010
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr4488
- NMPDR:   fig|266835.1.peg.3453
- HOGENOM:   HBG304855
- OMA:   YANMDRI
- ProtClustDB:   PRK05339
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30005; Mature: 30005

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEE
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
EPGIILYTVVDQKLARGIDERCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDA
CCCEEEEEEHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHH
EYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKTPTSIYLANRGIKTANIPIVL
HHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCEEE
GVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYAR
ECCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
QICTRHGWPMIDVSRRSIEETAAAIVALRGKNR
HHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEE
CCCCCCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
EPGIILYTVVDQKLARGIDERCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDA
CCCEEEEEEHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHH
EYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKTPTSIYLANRGIKTANIPIVL
HHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCEEE
GVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYAR
ECCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
QICTRHGWPMIDVSRRSIEETAAAIVALRGKNR
HHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968