| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473747
Identifier: 13473747
GI number: 13473747
Start: 3534335
End: 3534931
Strand: Direct
Name: 13473747
Synonym: mlr4445
Alternate gene names: NA
Gene position: 3534335-3534931 (Clockwise)
Preceding gene: 13473741
Following gene: 13473748
Centisome position: 50.23
GC content: 62.65
Gene sequence:
>597_bases ATGAGGGGCGTCAAGAACATGGCAAGTATTTTAGTGAAAGCTAATCTAAAGGGTGTCGCGGCATTGGCTGTCGTGTGGCT GTTGTCGGCCTCTATTGGCCCCGTGCTTGCCGAAGACGCCGCCAAGGAGTCCCAATCCAAACAGTCTCAGCCGAAGGAGG CCGGACCCAAGCCGGCCGACGCCAATCCATGGGCTGTGAACTGCTCCAGCGGCTCGACGGCCAACGAGCTTCAATGCCAG GTGTCGCAGAACCTCACCGAGGCCAAGACCGGGCAGCGCGTGCTGACCGTCACCGTGCGCCGCGACAACGCCAATGGCAG CTTCGCCATGCTGCTCGCTTTGCCGCACGGCCTGTTCCTGCCGTCCGGCGTCAGCTATCAGATCGACAGCGGCAAGAAAG TCACCGTCGCCATCCAGACCAGCGACCAGAACGGCGCCTATGCCGCGGTGCCGGTGGCGCCGGAACTGGCCAAGGCGATG AAGTCGGGGACGACGCTGAACATCGGCATGGAATCGGTGACGCGCAAGCCGGTCACCATCCCGGTTTCCCTCAAAGGCTT CGGCGCGGCGGTGGCCAAGCTGGAATCGATCAAGTAG
Upstream 100 bases:
>100_bases GTAGATTTGCCGGCTTGCTTGGTCCGGGACCCGGCTTTCGTAGCAGTCGCCATTGTTGTATCAAGCCTTTCCGAGAGAAT ACCTGCCGGAGCAAGGAAAA
Downstream 100 bases:
>100_bases GGATTGCGCCGGCAACCAACGGCCGATGCCCTATCAATTCGTCATCCACGGGCGGAGCAGTCACGCAGCGGCGTCGCGGA GATCCGAGGATGACGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRGVKNMASILVKANLKGVAALAVVWLLSASIGPVLAEDAAKESQSKQSQPKEAGPKPADANPWAVNCSSGSTANELQCQ VSQNLTEAKTGQRVLTVTVRRDNANGSFAMLLALPHGLFLPSGVSYQIDSGKKVTVAIQTSDQNGAYAAVPVAPELAKAM KSGTTLNIGMESVTRKPVTIPVSLKGFGAAVAKLESIK
Sequences:
>Translated_198_residues MRGVKNMASILVKANLKGVAALAVVWLLSASIGPVLAEDAAKESQSKQSQPKEAGPKPADANPWAVNCSSGSTANELQCQ VSQNLTEAKTGQRVLTVTVRRDNANGSFAMLLALPHGLFLPSGVSYQIDSGKKVTVAIQTSDQNGAYAAVPVAPELAKAM KSGTTLNIGMESVTRKPVTIPVSLKGFGAAVAKLESIK >Mature_198_residues MRGVKNMASILVKANLKGVAALAVVWLLSASIGPVLAEDAAKESQSKQSQPKEAGPKPADANPWAVNCSSGSTANELQCQ VSQNLTEAKTGQRVLTVTVRRDNANGSFAMLLALPHGLFLPSGVSYQIDSGKKVTVAIQTSDQNGAYAAVPVAPELAKAM KSGTTLNIGMESVTRKPVTIPVSLKGFGAAVAKLESIK
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ialB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010642 [H]
Pfam domain/function: PF06776 IalB [H]
EC number: NA
Molecular weight: Translated: 20513; Mature: 20513
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVKNMASILVKANLKGVAALAVVWLLSASIGPVLAEDAAKESQSKQSQPKEAGPKPAD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCC ANPWAVNCSSGSTANELQCQVSQNLTEAKTGQRVLTVTVRRDNANGSFAMLLALPHGLFL CCCCEEECCCCCCHHHEEEEHHCCCHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCCC PSGVSYQIDSGKKVTVAIQTSDQNGAYAAVPVAPELAKAMKSGTTLNIGMESVTRKPVTI CCCCEEEECCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHCCCEEEECHHHHCCCCEEE PVSLKGFGAAVAKLESIK EEECCCHHHHHHHHHCCC >Mature Secondary Structure MRGVKNMASILVKANLKGVAALAVVWLLSASIGPVLAEDAAKESQSKQSQPKEAGPKPAD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCC ANPWAVNCSSGSTANELQCQVSQNLTEAKTGQRVLTVTVRRDNANGSFAMLLALPHGLFL CCCCEEECCCCCCHHHEEEEHHCCCHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCCC PSGVSYQIDSGKKVTVAIQTSDQNGAYAAVPVAPELAKAMKSGTTLNIGMESVTRKPVTI CCCCEEEECCCCEEEEEEEECCCCCCEEEEECCHHHHHHHHCCCEEEECHHHHCCCCEEE PVSLKGFGAAVAKLESIK EEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]