| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473730
Identifier: 13473730
GI number: 13473730
Start: 3505929
End: 3506954
Strand: Direct
Name: 13473730
Synonym: mlr4426
Alternate gene names: NA
Gene position: 3505929-3506954 (Clockwise)
Preceding gene: 13473728
Following gene: 13473731
Centisome position: 49.83
GC content: 68.81
Gene sequence:
>1026_bases ATGGCGATATCAGCCGTGGCGCGGGAGACTGTTTTTGCCCTGCGCCGCCAGATCGCGAAGATCGAGGGAACGCTGCCCGA GCGCCTGCAGGCGCCGGCTGGCGCGCCGCTTGATGCCGACGCCAGCCCCGATCTCACAATCGTCCGGCGCGGTCTTGCCG CGGCCTTGCCGGATGCCTTCCTGCCGATCGGCATCGAACCCCTCGATGCCGCCCTGAGCGGCGGCCTGCCGAAAGCGGCC CTCAGCGAAATCCATGGCCTGGAAACCCGCGATGCCGGAGCCGTCGCCGGCTTTGCCCTGTCGCTCGCCAGCCTGATCCT CAAGCAGGCGCAAGGGCTGCCGGTGTTGTGGATCGGCACCACGGAAATCTTCCGCGAGGCGGGCTTTCCCTATGCCAGGG GGCTGCAATCCTCCTTCGGCATCGGGCCTGAGCAATTGCTGTTTTCCGAGGCGCCGAAACTCGTCGATGCGTTGTGGGTC GCCGAGGAAGCGGCGCGGATGACGGCGCTCGCCGCCGTCATCCTGGAAATCCGCGGCAATCCGCAGCGGCTCGACCTGAC CGCGACGCGGCGGCTGCATGCGCGGGCGCAAAGTGCCGGCCGCCCCGTATTCCTGCTGCGGCAGGCGGCCGAGCCCGAAC CGACGGCGGCGCCCGTCCGCCTCATCGTCTCGCCGGCGCCGGCCGTGCCGCGCGAGACCGTCGCCGGGCCGCTCGCCGGA TCGATCGGCCGCCCGGCCTTCGCCATCAGCATCGGCAAGAGCCGCACGGCCCTGCCTGGACAATTCACACTGGAGTGGAA CCCCGATGAACGCGTATTCGACGAAAGAAGGGGCGAGGAAGGCCGGGCAAAGAATCCTGTCCCTGTGGTTTCCCTATTTG GCGGCCGAAAGGATCCTGCGGCAGCGTCTGGGGCGGTCCTGGCGTTCCCGGCCCCAAGATCATCCGACGCCATCTCATCC GCCACTGGTGATCAGCCACCGCCAGGGCAACGCGCAGCGCATCTCAGCCCTCGACGAGCGGGCTGA
Upstream 100 bases:
>100_bases TCGCAGGAATAAATTCCTTATGACTCTGCTTGACTCTTCGGACCGCCTCTGGAATCTATAGGAACATAACAGGAACAACT CTGAGTGGACACTGACCGTC
Downstream 100 bases:
>100_bases GGCGCTGCACCTGAAGCGCGACATGGGCATTGCCGACGCGCGCGCCATGCATCCCTCGATCGACATTGTCGAGGCCGATC CGGAGGCAGACCGGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAISAVARETVFALRRQIAKIEGTLPERLQAPAGAPLDADASPDLTIVRRGLAAALPDAFLPIGIEPLDAALSGGLPKAA LSEIHGLETRDAGAVAGFALSLASLILKQAQGLPVLWIGTTEIFREAGFPYARGLQSSFGIGPEQLLFSEAPKLVDALWV AEEAARMTALAAVILEIRGNPQRLDLTATRRLHARAQSAGRPVFLLRQAAEPEPTAAPVRLIVSPAPAVPRETVAGPLAG SIGRPAFAISIGKSRTALPGQFTLEWNPDERVFDERRGEEGRAKNPVPVVSLFGGRKDPAAASGAVLAFPAPRSSDAISS ATGDQPPPGQRAAHLSPRRAG
Sequences:
>Translated_341_residues MAISAVARETVFALRRQIAKIEGTLPERLQAPAGAPLDADASPDLTIVRRGLAAALPDAFLPIGIEPLDAALSGGLPKAA LSEIHGLETRDAGAVAGFALSLASLILKQAQGLPVLWIGTTEIFREAGFPYARGLQSSFGIGPEQLLFSEAPKLVDALWV AEEAARMTALAAVILEIRGNPQRLDLTATRRLHARAQSAGRPVFLLRQAAEPEPTAAPVRLIVSPAPAVPRETVAGPLAG SIGRPAFAISIGKSRTALPGQFTLEWNPDERVFDERRGEEGRAKNPVPVVSLFGGRKDPAAASGAVLAFPAPRSSDAISS ATGDQPPPGQRAAHLSPRRAG >Mature_340_residues AISAVARETVFALRRQIAKIEGTLPERLQAPAGAPLDADASPDLTIVRRGLAAALPDAFLPIGIEPLDAALSGGLPKAAL SEIHGLETRDAGAVAGFALSLASLILKQAQGLPVLWIGTTEIFREAGFPYARGLQSSFGIGPEQLLFSEAPKLVDALWVA EEAARMTALAAVILEIRGNPQRLDLTATRRLHARAQSAGRPVFLLRQAAEPEPTAAPVRLIVSPAPAVPRETVAGPLAGS IGRPAFAISIGKSRTALPGQFTLEWNPDERVFDERRGEEGRAKNPVPVVSLFGGRKDPAAASGAVLAFPAPRSSDAISSA TGDQPPPGQRAAHLSPRRAG
Specific function: Unknown
COG id: COG4544
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35615; Mature: 35484
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISAVARETVFALRRQIAKIEGTLPERLQAPAGAPLDADASPDLTIVRRGLAAALPDAF CCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH LPIGIEPLDAALSGGLPKAALSEIHGLETRDAGAVAGFALSLASLILKQAQGLPVLWIGT CCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECH TEIFREAGFPYARGLQSSFGIGPEQLLFSEAPKLVDALWVAEEAARMTALAAVILEIRGN HHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQRLDLTATRRLHARAQSAGRPVFLLRQAAEPEPTAAPVRLIVSPAPAVPRETVAGPLAG CCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHC SIGRPAFAISIGKSRTALPGQFTLEWNPDERVFDERRGEEGRAKNPVPVVSLFGGRKDPA CCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC AASGAVLAFPAPRSSDAISSATGDQPPPGQRAAHLSPRRAG CCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AISAVARETVFALRRQIAKIEGTLPERLQAPAGAPLDADASPDLTIVRRGLAAALPDAF CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH LPIGIEPLDAALSGGLPKAALSEIHGLETRDAGAVAGFALSLASLILKQAQGLPVLWIGT CCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECH TEIFREAGFPYARGLQSSFGIGPEQLLFSEAPKLVDALWVAEEAARMTALAAVILEIRGN HHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQRLDLTATRRLHARAQSAGRPVFLLRQAAEPEPTAAPVRLIVSPAPAVPRETVAGPLAG CCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHC SIGRPAFAISIGKSRTALPGQFTLEWNPDERVFDERRGEEGRAKNPVPVVSLFGGRKDPA CCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC AASGAVLAFPAPRSSDAISSATGDQPPPGQRAAHLSPRRAG CCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA