| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473727
Identifier: 13473727
GI number: 13473727
Start: 3504545
End: 3504778
Strand: Direct
Name: 13473727
Synonym: msr4423
Alternate gene names: NA
Gene position: 3504545-3504778 (Clockwise)
Preceding gene: 13473726
Following gene: 13473728
Centisome position: 49.81
GC content: 60.26
Gene sequence:
>234_bases ATGGGCACTTACGACAGGACTTGGGACATGAAACTCTACCGCTTTCTCACCGGCCCGGACGACGCCAGCTTCTGCCACAA GGTGACGGCGGCGCTGAACAAGGGCTGGCATCTGTTCGGCTCGCCGACCTATGCCTATGACAAGAAAGCCAAGACCATGC GCTGCGGCCAGGCGGTGGTGAAGGATGTCGACGGCCAGGAATATGGGCCGGATACCAAGCTCAGCGACTGGTAG
Upstream 100 bases:
>100_bases AACGGCAAGATGGTCGAGCGGCTGCATCTGGCACAGGCCGAAAAACTGCTGGCGAAGGCGGCCGCCATCGGCGCATGATA TAGCCCCATGCTCGCGGGCT
Downstream 100 bases:
>100_bases CTGCCAGCTACCTTCCTCTCTTCGTCATCCTAGGGCGAAGCAAGGAGCGAAGCGACGCGGCGCAGACCCTAGGATCCATG CCGTGACGTTGGTCATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGTYDRTWDMKLYRFLTGPDDASFCHKVTAALNKGWHLFGSPTYAYDKKAKTMRCGQAVVKDVDGQEYGPDTKLSDW
Sequences:
>Translated_77_residues MGTYDRTWDMKLYRFLTGPDDASFCHKVTAALNKGWHLFGSPTYAYDKKAKTMRCGQAVVKDVDGQEYGPDTKLSDW >Mature_76_residues GTYDRTWDMKLYRFLTGPDDASFCHKVTAALNKGWHLFGSPTYAYDKKAKTMRCGQAVVKDVDGQEYGPDTKLSDW
Specific function: Unknown
COG id: COG5515
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8786; Mature: 8655
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTYDRTWDMKLYRFLTGPDDASFCHKVTAALNKGWHLFGSPTYAYDKKAKTMRCGQAVV CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHH KDVDGQEYGPDTKLSDW HCCCCCCCCCCCCCCCC >Mature Secondary Structure GTYDRTWDMKLYRFLTGPDDASFCHKVTAALNKGWHLFGSPTYAYDKKAKTMRCGQAVV CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHH KDVDGQEYGPDTKLSDW HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA