Click here to switch to the map view.

The map label for this gene is yuzN [H]

Identifier: 13473717

GI number: 13473717

Start: 3496179

End: 3496496

Strand: Direct

Name: yuzN [H]

Synonym: mlr4409

Alternate gene names: 13473717

Gene position: 3496179-3496496 (Clockwise)

Preceding gene: 13473716

Following gene: 13473720

Centisome position: 49.69

GC content: 61.01

Gene sequence:

>318_bases
ATGAGCATGGATGCAGTCTTTCGCGCCCTGGCCGACCCGACACGCCGGCAATTGCTGGACAACCTCCATGCCCGGAACGG
GCAGACGCTGAACGCGCTGTGCGCGGAGATGGACATGACACGCCAGGCGGTGACCAAGCATTTGGCGATCCTGGAGGAAG
CCAACCTCGTCACCACGCTGCGCAAGGGACGCGAGAAGCAGCACTACCTCAACCCGGTTCCGATCAACGAGATCGCCGAG
CGCTGGATCGGCAAGTTCGAGCGCCATCGGCTGGATGCATTGAGTGATCTGAAGAAACGCCTCGAAAGGGAAGACTGA

Upstream 100 bases:

>100_bases
CCCGCAAGGGCTGACTTTTTTCTCCCGTGGCCGCGCCCGGCCGCCGACGGCGTGCGATCTTGCCGCTTGACATGCAACCA
AATGGTTGCATATTAAAGCC

Downstream 100 bases:

>100_bases
TGAGCAACAGCTTCGTTTACGTGACCTACATCCGCACCACGGCCGAAAAGCTCTGGGAGGCGCTGACCGACCCGGAGTTC
AACCGGCAGTTCTTCCTCTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSMDAVFRALADPTRRQLLDNLHARNGQTLNALCAEMDMTRQAVTKHLAILEEANLVTTLRKGREKQHYLNPVPINEIAE
RWIGKFERHRLDALSDLKKRLERED

Sequences:

>Translated_105_residues
MSMDAVFRALADPTRRQLLDNLHARNGQTLNALCAEMDMTRQAVTKHLAILEEANLVTTLRKGREKQHYLNPVPINEIAE
RWIGKFERHRLDALSDLKKRLERED
>Mature_104_residues
SMDAVFRALADPTRRQLLDNLHARNGQTLNALCAEMDMTRQAVTKHLAILEEANLVTTLRKGREKQHYLNPVPINEIAER
WIGKFERHRLDALSDLKKRLERED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12218; Mature: 12087

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMDAVFRALADPTRRQLLDNLHARNGQTLNALCAEMDMTRQAVTKHLAILEEANLVTTL
CCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGREKQHYLNPVPINEIAERWIGKFERHRLDALSDLKKRLERED
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMDAVFRALADPTRRQLLDNLHARNGQTLNALCAEMDMTRQAVTKHLAILEEANLVTTL
CHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGREKQHYLNPVPINEIAERWIGKFERHRLDALSDLKKRLERED
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]