| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cshA [H]
Identifier: 13473704
GI number: 13473704
Start: 3486002
End: 3487864
Strand: Direct
Name: cshA [H]
Synonym: mlr4393
Alternate gene names: 13473704
Gene position: 3486002-3487864 (Clockwise)
Preceding gene: 13473701
Following gene: 13473705
Centisome position: 49.54
GC content: 67.53
Gene sequence:
>1863_bases ATGTCCAACTTTGTAGGTATCGTCCCGGCGCTGGCACAGGCGCTGGAAAAACGCGGCTATTCCGAACTGACACCGGTGCA GAAGGCGGTGCTTGAACTTGGGTCCGCCGATGCGCTGGTGTCGGCGCAGACCGGCTCCGGCAAGACCGTGGCCTTCGGCC TTGCCATGGCGCCGACGCTTCTCGACGGCGCCGAGCGCTTTGGCGCGGCCATGGCGCCACTGGCATTGGCGGTGGCGCCG ACGCGCGAACTGGCGCTGCAGGTGACGCGTGAACTGGAATGGCTTTACGAGCCGACCGGCGCCACGGTGGCGTCCTGCGT CGGCGGCATGGACATGCGCACCGAGCGGCGCGCGCTGGAGCGCGGCGCCCATATCGTCGTCGGCACGCCCGGCCGTTTGC GCGACCACATCACGCGCAACTCGCTCGACATGTCGGCGCTGAAGGCGGTGGTGCTCGACGAGGCCGACGAGATGCTCGAT CTCGGTTTTCGCGAGGACCTCGAATTCATCCTCGATGCCGCGCCGGCCGAGCGCCGCACGCTGATGTTCTCGGCTACCGT GCCGCGTTCGATCGCAACGCTGGCGCAAGGCTATCAGCGCGATGCCGTGCGCATCTCCGCCGCCGGCGAGGAAAAGCAGC ATCTCGACATCGAATACCGGGCGCTCAACGTCGCCCAGGCCGATCGCGAGAACGCCATCATCAACGTGCTGCGTTTCTAT GAGGCCAAGAACGCGCTGGTGTTCTGCAACACGCGTGCCGCCGTCAATCATCTGACCGCGCGCTTCAACAACCGCAATTT TTCGGTCGTGGCGCTTTCGGGCGAGCTCAGCCAGAACGAGCGCAGCCACGCGCTGCAGGCGATGCGCGACGGCCGCGCCA AGGTATGCATCGCAACGGATGTCGCGGCGCGCGGCATCGACTTGCCCAACCTCGAACTGGTCATCCACGCCGACCTGCCG ACCAATCCCGAAACGCTGCTGCACCGCAGCGGCCGCACCGGCCGCGCCGGGCGCAAGGGCGTCAGCGCGCTGATCGTGCC AGGCAGTGCCCGCAGGCGCACCGAGCGGCTGTTGCAGAACGCCGGCCTCAAGGCGACCTGGGCAAGCCCGCCCTCGGCCG ACGACGTGATCCGCCGCGACGACGAGCGCATCCTGGCCGATCCGGCCTTCGACGAGCCGGTGAAGGACGATGAGCGCGCT TTCATCGACGCGCTTCTCGCCAAGCATGGCGCCGAACAGGTGGCCGCCGCCTTCGTGCGCCAGTGCCGCGCCAGCCGCTC GGCGCCCGAGGATCTGATAGACGTCGCTCCCTTCACGCCTTCACGCGAAAGGCCGGCGGGCGAAAAATTCGCGCAGCGCG ACGAGGCGCCGAGCCGCCGCGACGATTTCGGCGCCAGCGTCTGGTTCTCGCTGTCGGTCGGGCGGAGGCAGAATGCAGAA CCGCGCTGGCTGATCCCGATGCTGTGCCGCACCGGCAGCATCTCCAAGCGCGAGATCGGCGCCATCAAGATGCAGCCGGA AGAAACCTTCGTGCAGATCGCCGCGGACTGGGCCGATCGCTTTCTTGCCGCCATCGGGCCCGACCGCAAACTGCAGGGCA ATATCCTGGTGAAGCGGCTCGACGGCACGCCGGACCTGTCGCGGGCCGGCTATCAGGCGCCGAGCCCCGACAAGAAGCCG CATCGCGGCAAGGCGCCATTCGACCCGAACGCGCCGAAGCGCAAATTCGAGAAGCGCACGCCGGCTTCAGCCGAGCAGCG CCCAGCCCATGAGGCAAAGCCGTGGGCGAAAAAGCCGGGCAAGCCGAAATTCGACAATGCCGGCCCGCCGAAGCACAAGA AGCCGAAGAAGCGGCCTTCGTAG
Upstream 100 bases:
>100_bases GCGGCAGGAAGTACGAACGGCCAAGATTGTTGGGCTGGCGCGGCGCCGGCCCCGATGTGCTCCATGATGAGCGCAGAACC CTGAATTCCGAAAGAGCGAG
Downstream 100 bases:
>100_bases GACAGGGTTGACGCCGCTGGCTGGCGTCAGAATGCTCGACTGTCATGGCCCGCTTTGGCCAAGATGCCTGCACGTGAAGC TTTACGCCTGATTTGCCGCT
Product: DEAD-box protein, ATP-independent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MSNFVGIVPALAQALEKRGYSELTPVQKAVLELGSADALVSAQTGSGKTVAFGLAMAPTLLDGAERFGAAMAPLALAVAP TRELALQVTRELEWLYEPTGATVASCVGGMDMRTERRALERGAHIVVGTPGRLRDHITRNSLDMSALKAVVLDEADEMLD LGFREDLEFILDAAPAERRTLMFSATVPRSIATLAQGYQRDAVRISAAGEEKQHLDIEYRALNVAQADRENAIINVLRFY EAKNALVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRAKVCIATDVAARGIDLPNLELVIHADLP TNPETLLHRSGRTGRAGRKGVSALIVPGSARRRTERLLQNAGLKATWASPPSADDVIRRDDERILADPAFDEPVKDDERA FIDALLAKHGAEQVAAAFVRQCRASRSAPEDLIDVAPFTPSRERPAGEKFAQRDEAPSRRDDFGASVWFSLSVGRRQNAE PRWLIPMLCRTGSISKREIGAIKMQPEETFVQIAADWADRFLAAIGPDRKLQGNILVKRLDGTPDLSRAGYQAPSPDKKP HRGKAPFDPNAPKRKFEKRTPASAEQRPAHEAKPWAKKPGKPKFDNAGPPKHKKPKKRPS
Sequences:
>Translated_620_residues MSNFVGIVPALAQALEKRGYSELTPVQKAVLELGSADALVSAQTGSGKTVAFGLAMAPTLLDGAERFGAAMAPLALAVAP TRELALQVTRELEWLYEPTGATVASCVGGMDMRTERRALERGAHIVVGTPGRLRDHITRNSLDMSALKAVVLDEADEMLD LGFREDLEFILDAAPAERRTLMFSATVPRSIATLAQGYQRDAVRISAAGEEKQHLDIEYRALNVAQADRENAIINVLRFY EAKNALVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRAKVCIATDVAARGIDLPNLELVIHADLP TNPETLLHRSGRTGRAGRKGVSALIVPGSARRRTERLLQNAGLKATWASPPSADDVIRRDDERILADPAFDEPVKDDERA FIDALLAKHGAEQVAAAFVRQCRASRSAPEDLIDVAPFTPSRERPAGEKFAQRDEAPSRRDDFGASVWFSLSVGRRQNAE PRWLIPMLCRTGSISKREIGAIKMQPEETFVQIAADWADRFLAAIGPDRKLQGNILVKRLDGTPDLSRAGYQAPSPDKKP HRGKAPFDPNAPKRKFEKRTPASAEQRPAHEAKPWAKKPGKPKFDNAGPPKHKKPKKRPS >Mature_619_residues SNFVGIVPALAQALEKRGYSELTPVQKAVLELGSADALVSAQTGSGKTVAFGLAMAPTLLDGAERFGAAMAPLALAVAPT RELALQVTRELEWLYEPTGATVASCVGGMDMRTERRALERGAHIVVGTPGRLRDHITRNSLDMSALKAVVLDEADEMLDL GFREDLEFILDAAPAERRTLMFSATVPRSIATLAQGYQRDAVRISAAGEEKQHLDIEYRALNVAQADRENAIINVLRFYE AKNALVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRAKVCIATDVAARGIDLPNLELVIHADLPT NPETLLHRSGRTGRAGRKGVSALIVPGSARRRTERLLQNAGLKATWASPPSADDVIRRDDERILADPAFDEPVKDDERAF IDALLAKHGAEQVAAAFVRQCRASRSAPEDLIDVAPFTPSRERPAGEKFAQRDEAPSRRDDFGASVWFSLSVGRRQNAEP RWLIPMLCRTGSISKREIGAIKMQPEETFVQIAADWADRFLAAIGPDRKLQGNILVKRLDGTPDLSRAGYQAPSPDKKPH RGKAPFDPNAPKRKFEKRTPASAEQRPAHEAKPWAKKPGKPKFDNAGPPKHKKPKKRPS
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI50659095, Length=390, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=6e-55, Organism=Homo sapiens, GI13129006, Length=392, Percent_Identity=33.4183673469388, Blast_Score=212, Evalue=1e-54, Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=34.0116279069767, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI20149629, Length=383, Percent_Identity=30.2872062663185, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI262118318, Length=344, Percent_Identity=34.8837209302326, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI216548263, Length=344, Percent_Identity=34.8837209302326, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI262231852, Length=344, Percent_Identity=34.8837209302326, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI13518015, Length=344, Percent_Identity=34.8837209302326, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=32.171581769437, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI41327771, Length=371, Percent_Identity=31.8059299191375, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI169881239, Length=346, Percent_Identity=35.2601156069364, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI13514809, Length=346, Percent_Identity=35.2601156069364, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI21071032, Length=388, Percent_Identity=31.1855670103093, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI301171467, Length=346, Percent_Identity=34.971098265896, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI87196351, Length=346, Percent_Identity=34.971098265896, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI301171475, Length=346, Percent_Identity=34.971098265896, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI4503529, Length=306, Percent_Identity=35.2941176470588, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI83700235, Length=306, Percent_Identity=35.6209150326797, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI31542656, Length=419, Percent_Identity=31.980906921241, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI222352149, Length=341, Percent_Identity=33.1378299120235, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=33.1444759206799, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=33.1444759206799, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=32.183908045977, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=32.183908045977, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=32.033426183844, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI188035877, Length=351, Percent_Identity=30.7692307692308, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=30.5949008498584, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI17505907, Length=399, Percent_Identity=30.3258145363409, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI41327776, Length=383, Percent_Identity=28.9817232375979, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI41327779, Length=356, Percent_Identity=31.4606741573034, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI51094101, Length=348, Percent_Identity=31.0344827586207, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI164419743, Length=348, Percent_Identity=31.0344827586207, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI256223453, Length=377, Percent_Identity=28.9124668435013, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI164419732, Length=339, Percent_Identity=34.2182890855457, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=30.1408450704225, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI13514831, Length=403, Percent_Identity=30.7692307692308, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI21040371, Length=345, Percent_Identity=28.1159420289855, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI38327634, Length=349, Percent_Identity=30.0859598853868, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI164664518, Length=392, Percent_Identity=26.2755102040816, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI4758112, Length=345, Percent_Identity=28.695652173913, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI18375623, Length=345, Percent_Identity=28.695652173913, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=32.9608938547486, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=32.6815642458101, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=33.0459770114943, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=33.7423312883436, Blast_Score=146, Evalue=7e-35, Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=29.6052631578947, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI9506931, Length=379, Percent_Identity=28.2321899736148, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI20336298, Length=228, Percent_Identity=35.9649122807018, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI256773275, Length=377, Percent_Identity=27.8514588859416, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI38569505, Length=348, Percent_Identity=29.5977011494253, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI38569503, Length=348, Percent_Identity=29.5977011494253, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=28.169014084507, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4826686, Length=122, Percent_Identity=31.9672131147541, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI87082221, Length=536, Percent_Identity=31.9029850746269, Blast_Score=234, Evalue=9e-63, Organism=Escherichia coli, GI1787605, Length=372, Percent_Identity=36.0215053763441, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI1787016, Length=340, Percent_Identity=33.2352941176471, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1788930, Length=339, Percent_Identity=35.3982300884956, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1790214, Length=349, Percent_Identity=34.3839541547278, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI48994977, Length=349, Percent_Identity=24.3553008595989, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71987143, Length=322, Percent_Identity=36.3354037267081, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=33.6088154269972, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=35.1744186046512, Blast_Score=209, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=35.1744186046512, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17510307, Length=358, Percent_Identity=35.195530726257, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71995514, Length=358, Percent_Identity=35.195530726257, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17510309, Length=358, Percent_Identity=35.195530726257, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI86570094, Length=349, Percent_Identity=35.8166189111748, Blast_Score=195, Evalue=8e-50, Organism=Caenorhabditis elegans, GI71995718, Length=352, Percent_Identity=34.375, Blast_Score=185, Evalue=7e-47, Organism=Caenorhabditis elegans, GI32565321, Length=367, Percent_Identity=32.425068119891, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI115533224, Length=337, Percent_Identity=33.5311572700297, Blast_Score=178, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17507945, Length=337, Percent_Identity=31.7507418397626, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17537549, Length=391, Percent_Identity=30.9462915601023, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=31.830985915493, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17509811, Length=346, Percent_Identity=32.6589595375723, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17552114, Length=352, Percent_Identity=28.6931818181818, Blast_Score=172, Evalue=6e-43, Organism=Caenorhabditis elegans, GI115532546, Length=354, Percent_Identity=32.7683615819209, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=31.989247311828, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=29.7687861271676, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI115532548, Length=354, Percent_Identity=32.7683615819209, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=29.7687861271676, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=332, Percent_Identity=30.421686746988, Blast_Score=162, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17510559, Length=397, Percent_Identity=28.7153652392947, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71982858, Length=361, Percent_Identity=28.2548476454294, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507879, Length=365, Percent_Identity=30.1369863013699, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507881, Length=354, Percent_Identity=30.225988700565, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17507641, Length=395, Percent_Identity=29.3670886075949, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=30.3468208092486, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=29.6296296296296, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=28.8713910761155, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=28.8713910761155, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17556951, Length=374, Percent_Identity=30.4812834224599, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=28.5347043701799, Blast_Score=136, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17553716, Length=327, Percent_Identity=28.4403669724771, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71990816, Length=380, Percent_Identity=28.6842105263158, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193208216, Length=371, Percent_Identity=28.3018867924528, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17508543, Length=349, Percent_Identity=29.512893982808, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148203, Length=400, Percent_Identity=22, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.8627450980392, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25148205, Length=335, Percent_Identity=21.4925373134328, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71987152, Length=90, Percent_Identity=44.4444444444444, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25148291, Length=134, Percent_Identity=28.3582089552239, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321856, Length=347, Percent_Identity=36.3112391930836, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324778, Length=339, Percent_Identity=35.3982300884956, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=33.7874659400545, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321360, Length=331, Percent_Identity=32.9305135951662, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=314, Percent_Identity=34.7133757961783, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322323, Length=314, Percent_Identity=34.7133757961783, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6324217, Length=319, Percent_Identity=32.9153605015674, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6320224, Length=338, Percent_Identity=31.3609467455621, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=32.8651685393258, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321111, Length=357, Percent_Identity=32.2128851540616, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320041, Length=379, Percent_Identity=28.2321899736148, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=367, Percent_Identity=32.6975476839237, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320449, Length=330, Percent_Identity=34.8484848484849, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=347, Percent_Identity=30.835734870317, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323947, Length=342, Percent_Identity=31.5789473684211, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320119, Length=348, Percent_Identity=29.0229885057471, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=29.126213592233, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=28.8135593220339, Blast_Score=143, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6320400, Length=366, Percent_Identity=28.4153005464481, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=25.3481894150418, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=451, Percent_Identity=26.6075388026608, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6321267, Length=336, Percent_Identity=28.2738095238095, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323306, Length=442, Percent_Identity=25.5656108597285, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6320173, Length=235, Percent_Identity=29.7872340425532, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324366, Length=161, Percent_Identity=31.055900621118, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=31.6666666666667, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI24645031, Length=333, Percent_Identity=35.7357357357357, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24584399, Length=334, Percent_Identity=33.8323353293413, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136814, Length=356, Percent_Identity=36.5168539325843, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24582080, Length=293, Percent_Identity=36.1774744027304, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582078, Length=293, Percent_Identity=36.1774744027304, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI17136248, Length=293, Percent_Identity=36.1774744027304, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582075, Length=293, Percent_Identity=36.1774744027304, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI21355075, Length=341, Percent_Identity=34.6041055718475, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI17985987, Length=366, Percent_Identity=33.6065573770492, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=32.2033898305085, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=32.4858757062147, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24662330, Length=361, Percent_Identity=31.3019390581717, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=31.1170212765957, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17977678, Length=384, Percent_Identity=30.46875, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24644479, Length=341, Percent_Identity=31.3782991202346, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24644483, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI281361218, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24644481, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24644487, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=7e-42, Organism=Drosophila melanogaster, GI45551833, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=7e-42, Organism=Drosophila melanogaster, GI24644485, Length=341, Percent_Identity=31.3782991202346, Blast_Score=169, Evalue=7e-42, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=30.5039787798408, Blast_Score=169, Evalue=7e-42, Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=30.1675977653631, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI28575014, Length=346, Percent_Identity=31.2138728323699, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571808, Length=345, Percent_Identity=30.1449275362319, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI28571809, Length=345, Percent_Identity=30.1449275362319, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=29.8850574712644, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=29.8850574712644, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=29.8850574712644, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=26.4044943820225, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=26.4044943820225, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571338, Length=427, Percent_Identity=27.6346604215457, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI18859659, Length=427, Percent_Identity=27.6346604215457, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI281365720, Length=301, Percent_Identity=31.8936877076412, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=32.6027397260274, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI20130173, Length=443, Percent_Identity=27.5395033860045, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24642822, Length=359, Percent_Identity=28.4122562674095, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24666101, Length=344, Percent_Identity=31.3953488372093, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17647335, Length=386, Percent_Identity=25.1295336787565, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=26.9754768392371, Blast_Score=113, Evalue=5e-25, Organism=Drosophila melanogaster, GI17136666, Length=433, Percent_Identity=28.175519630485, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=28.0487804878049, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24643725, Length=365, Percent_Identity=25.2054794520548, Blast_Score=99, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 67830; Mature: 67699
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFVGIVPALAQALEKRGYSELTPVQKAVLELGSADALVSAQTGSGKTVAFGLAMAPTL CCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCEEEEHHHHHHHH LDGAERFGAAMAPLALAVAPTRELALQVTRELEWLYEPTGATVASCVGGMDMRTERRALE HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHH RGAHIVVGTPGRLRDHITRNSLDMSALKAVVLDEADEMLDLGFREDLEFILDAAPAERRT CCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCCEE LMFSATVPRSIATLAQGYQRDAVRISAAGEEKQHLDIEYRALNVAQADRENAIINVLRFY EEEECCCCHHHHHHHHCHHCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH EAKNALVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRAKVCIATD HCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC VAARGIDLPNLELVIHADLPTNPETLLHRSGRTGRAGRKGVSALIVPGSARRRTERLLQN HHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH AGLKATWASPPSADDVIRRDDERILADPAFDEPVKDDERAFIDALLAKHGAEQVAAAFVR CCCEEEECCCCCHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH QCRASRSAPEDLIDVAPFTPSRERPAGEKFAQRDEAPSRRDDFGASVWFSLSVGRRQNAE HHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC PRWLIPMLCRTGSISKREIGAIKMQPEETFVQIAADWADRFLAAIGPDRKLQGNILVKRL CCEEHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE DGTPDLSRAGYQAPSPDKKPHRGKAPFDPNAPKRKFEKRTPASAEQRPAHEAKPWAKKPG CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCC KPKFDNAGPPKHKKPKKRPS CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNFVGIVPALAQALEKRGYSELTPVQKAVLELGSADALVSAQTGSGKTVAFGLAMAPTL CCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCEEEEHHHHHHHH LDGAERFGAAMAPLALAVAPTRELALQVTRELEWLYEPTGATVASCVGGMDMRTERRALE HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHH RGAHIVVGTPGRLRDHITRNSLDMSALKAVVLDEADEMLDLGFREDLEFILDAAPAERRT CCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCCEE LMFSATVPRSIATLAQGYQRDAVRISAAGEEKQHLDIEYRALNVAQADRENAIINVLRFY EEEECCCCHHHHHHHHCHHCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHH EAKNALVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRAKVCIATD HCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC VAARGIDLPNLELVIHADLPTNPETLLHRSGRTGRAGRKGVSALIVPGSARRRTERLLQN HHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH AGLKATWASPPSADDVIRRDDERILADPAFDEPVKDDERAFIDALLAKHGAEQVAAAFVR CCCEEEECCCCCHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH QCRASRSAPEDLIDVAPFTPSRERPAGEKFAQRDEAPSRRDDFGASVWFSLSVGRRQNAE HHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCC PRWLIPMLCRTGSISKREIGAIKMQPEETFVQIAADWADRFLAAIGPDRKLQGNILVKRL CCEEHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE DGTPDLSRAGYQAPSPDKKPHRGKAPFDPNAPKRKFEKRTPASAEQRPAHEAKPWAKKPG CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCC KPKFDNAGPPKHKKPKKRPS CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA