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The map label for this gene is omp19

Identifier: 13473645

GI number: 13473645

Start: 3433331

End: 3433870

Strand: Reverse

Name: omp19

Synonym: mll4312

Alternate gene names: 13473645

Gene position: 3433870-3433331 (Counterclockwise)

Preceding gene: 13473648

Following gene: 13473644

Centisome position: 48.8

GC content: 67.96

Gene sequence:

>540_bases
ATGAATTTTTCGAAAAGCGGTCTTGTGGCCGTATCGCTGGCGGCGCTCGTTGCGAGCGGTTGCTCAACCTCACGCTTCTC
GTCCATGGACGACCAGCAACCGGCGCCGCTGCAGCCGGCGCCGGCCGGCCAGGTGACCTCCAATCAGCTGCCGCCGCCGG
CCTCGCCCGGCAGCACCGACCCGTCGAAGTTCCCGACCGCGCCGGCGAACACGCAGGTTGCGTCCTTGCCGCCGGACGGT
CAGGCCCCCGCCGGCGCCTCGGATCTCAGCGCGGCAGCCGTCGCCGGTGTCTGGAATGCCAGCGTTTCCGGGCAGAGCTG
CAAGATCGCGACGCCGCAGACCAAGTTCGGCGCCGGCTTCCGCGCCGGGCCGCTGCATTGCCCCGCGCCCATCGACGGCA
TCAAGTCGTGGAACGTCGCCGGCAAGCAGCTGACGCTTTACGACGAGAATGGCGGCTCGCTGGCGCGGCTCTATTCCTCG
GGCGGCTCGAAATTCGACGGCCAGACTTCCAACGGTCAGCCGATTTCGCTTACAAGGTAG

Upstream 100 bases:

>100_bases
TTTAACCATATCGGGTTGAAATTTCGCCACCTTCTCCATCTTGGTGGGAGGTGATATTGCGCGGACGGCTTCCCCCCAGC
CGGATCCGACGGAGGTTGTA

Downstream 100 bases:

>100_bases
CCCGATCTCCCCGGTGCATGTCGCCCGAACTGGGGCTCCGGTTTTGGGGCAACGACGTGCATGAAAAAAGACGTGACCGA
TGCATCTGCGTGACGGCCTC

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNFSKSGLVAVSLAALVASGCSTSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTDPSKFPTAPANTQVASLPPDG
QAPAGASDLSAAAVAGVWNASVSGQSCKIATPQTKFGAGFRAGPLHCPAPIDGIKSWNVAGKQLTLYDENGGSLARLYSS
GGSKFDGQTSNGQPISLTR

Sequences:

>Translated_179_residues
MNFSKSGLVAVSLAALVASGCSTSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTDPSKFPTAPANTQVASLPPDG
QAPAGASDLSAAAVAGVWNASVSGQSCKIATPQTKFGAGFRAGPLHCPAPIDGIKSWNVAGKQLTLYDENGGSLARLYSS
GGSKFDGQTSNGQPISLTR
>Mature_179_residues
MNFSKSGLVAVSLAALVASGCSTSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTDPSKFPTAPANTQVASLPPDG
QAPAGASDLSAAAVAGVWNASVSGQSCKIATPQTKFGAGFRAGPLHCPAPIDGIKSWNVAGKQLTLYDENGGSLARLYSS
GGSKFDGQTSNGQPISLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp19 lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMP19_RHILO (Q98EC1)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105213.1
- GeneID:   1227874
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll4312
- NMPDR:   fig|266835.1.peg.3317
- HOGENOM:   HBG348791
- OMA:   LAKVSAW
- ProtClustDB:   CLSK864010
- InterPro:   IPR021140
- InterPro:   IPR010571
- InterPro:   IPR016085
- PIRSF:   PIRSF034005

Pfam domain/function: PF02974 Inh; SSF50882 Protease_inh_b-brl

EC number: NA

Molecular weight: Translated: 17927; Mature: 17927

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSKSGLVAVSLAALVASGCSTSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTD
CCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSKFPTAPANTQVASLPPDGQAPAGASDLSAAAVAGVWNASVSGQSCKIATPQTKFGAGF
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
RAGPLHCPAPIDGIKSWNVAGKQLTLYDENGGSLARLYSSGGSKFDGQTSNGQPISLTR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MNFSKSGLVAVSLAALVASGCSTSRFSSMDDQQPAPLQPAPAGQVTSNQLPPPASPGSTD
CCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSKFPTAPANTQVASLPPDGQAPAGASDLSAAAVAGVWNASVSGQSCKIATPQTKFGAGF
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
RAGPLHCPAPIDGIKSWNVAGKQLTLYDENGGSLARLYSSGGSKFDGQTSNGQPISLTR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968