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The map label for this gene is ohrR [H]

Identifier: 13473620

GI number: 13473620

Start: 3411533

End: 3412069

Strand: Reverse

Name: ohrR [H]

Synonym: mll4280

Alternate gene names: 13473620

Gene position: 3412069-3411533 (Counterclockwise)

Preceding gene: 13473621

Following gene: 13473619

Centisome position: 48.49

GC content: 67.23

Gene sequence:

>537_bases
ATGACGGGAAAGACCACAAAGAACACCAGCGACGTCCCGGCGGAGACCGCCGGGACGATCAGCGTACCGCGGCTCGATCA
GCAGCTCTGCTTCGCGCTCTATTCGGCCAGCGGGCTGATGACCAAGATCTACCGGCCGTTGCTCGATCCGCTCGGCCTGA
CCTATCCGCAATATCTGGTCATGTTGGCGCTATGGGAGCACGCGCCGAGCACGGTGGGCGCGCTTGGCGAGGCGCTGGGC
CTCGATTCCGCGACGTTGACGCCGCTGCTCAAGCGGATGGAGGCGAGCGGGCTTGTCACCCGCCGTCGCGATGCCGCCGA
TGAGCGCCGCGTGCTGGTCGAGCCGACGGCCAGGGGCCAGGCTCTGAGTGCGCGAGCGCAGGATGTGTCCGCGGCGCTCG
CCTGCAGCGTACCGCTCCAGCCTGGTGAAGCGAAAGCGCTGCACGCGACGCTCACCCATCTCGTTGCCGACTTGCGCAAC
GCTGTGGCGGAAGACGCCTCGGCCGATGCGGAGGCGCTGGTTTCTGGTTCGAGATAG

Upstream 100 bases:

>100_bases
AGGCAGCCGCGGAAGCGCTTGTATCGGAAGCGCACAAGATCTGCCCGTATTCCAACGCCATCCGGGGCAATGTCGACGTG
GCGCTTTCGGTAAAGGCGGC

Downstream 100 bases:

>100_bases
CCAGATCATCCCGAAATCCCTGAATTCAGGGCATCCGAATCCCTTTTCGCGCGCGCTGACGCAGTGGACCGTCTTGCATG
GCGCATGCGGAAAGCTAAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTGKTTKNTSDVPAETAGTISVPRLDQQLCFALYSASGLMTKIYRPLLDPLGLTYPQYLVMLALWEHAPSTVGALGEALG
LDSATLTPLLKRMEASGLVTRRRDAADERRVLVEPTARGQALSARAQDVSAALACSVPLQPGEAKALHATLTHLVADLRN
AVAEDASADAEALVSGSR

Sequences:

>Translated_178_residues
MTGKTTKNTSDVPAETAGTISVPRLDQQLCFALYSASGLMTKIYRPLLDPLGLTYPQYLVMLALWEHAPSTVGALGEALG
LDSATLTPLLKRMEASGLVTRRRDAADERRVLVEPTARGQALSARAQDVSAALACSVPLQPGEAKALHATLTHLVADLRN
AVAEDASADAEALVSGSR
>Mature_177_residues
TGKTTKNTSDVPAETAGTISVPRLDQQLCFALYSASGLMTKIYRPLLDPLGLTYPQYLVMLALWEHAPSTVGALGEALGL
DSATLTPLLKRMEASGLVTRRRDAADERRVLVEPTARGQALSARAQDVSAALACSVPLQPGEAKALHATLTHLVADLRNA
VAEDASADAEALVSGSR

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18752; Mature: 18620

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKTTKNTSDVPAETAGTISVPRLDQQLCFALYSASGLMTKIYRPLLDPLGLTYPQYLV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MLALWEHAPSTVGALGEALGLDSATLTPLLKRMEASGLVTRRRDAADERRVLVEPTARGQ
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCH
ALSARAQDVSAALACSVPLQPGEAKALHATLTHLVADLRNAVAEDASADAEALVSGSR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
TGKTTKNTSDVPAETAGTISVPRLDQQLCFALYSASGLMTKIYRPLLDPLGLTYPQYLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MLALWEHAPSTVGALGEALGLDSATLTPLLKRMEASGLVTRRRDAADERRVLVEPTARGQ
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCH
ALSARAQDVSAALACSVPLQPGEAKALHATLTHLVADLRNAVAEDASADAEALVSGSR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]