| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473610
Identifier: 13473610
GI number: 13473610
Start: 3402193
End: 3402633
Strand: Reverse
Name: 13473610
Synonym: mll4267
Alternate gene names: NA
Gene position: 3402633-3402193 (Counterclockwise)
Preceding gene: 13473612
Following gene: 13473609
Centisome position: 48.36
GC content: 64.4
Gene sequence:
>441_bases ATGGCGCTACGCCGGACGGTTTGGGTGTCCGTTTTCCCGTTGCTTGCTATCCTTGCGGCCTGTGTGCCGCAGGATGGCGC GCCGAAGGCGGCCAATATCGTCTCGCCTGCGCCGGCTCAGCAGTCCGTCGCATCCGCGGCGCCATCGGCATCCGCGCCTC CAGCACCGCCAACCAAGATCACCACCGATCTCACCGCGCCGCGATCCATGGTAGGTACGGCGACCTATGGATGCGGCAAT GGCAGCGCCATCACCATTCAGAATCTTGGCTCGTCGTTGCGTGTGATCGAGCCGAATGGTGCGACCGAAGAGTTTGCCGC GTCGCCCGCCAACCAGTCCAGCCGTTACCAGGAAGCCGCCACGCATAACGCAATCGTGATCGACGGGCGTGAGGCGCTGG TGATGAAGAGGGGCTCGACGCCGCAGACCTGCAAGCGCTAG
Upstream 100 bases:
>100_bases ACCATCGCGGCCGGCATCGAATGGATCCGAGGGTGATCTCGGGGCAACCTTGATCTTGGCGCAGCATCGTGGCTAGTCTG CCGCGGGGGGAGGACAGCAT
Downstream 100 bases:
>100_bases GCCGCATGGCCAAGAAGTAGCGTATGCTGCACTGCAGCGATATCGAGCCGGCTTTGGGTAATCCACCCCTAATCGATTGA AGCCCCGAGCTGCCTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MALRRTVWVSVFPLLAILAACVPQDGAPKAANIVSPAPAQQSVASAAPSASAPPAPPTKITTDLTAPRSMVGTATYGCGN GSAITIQNLGSSLRVIEPNGATEEFAASPANQSSRYQEAATHNAIVIDGREALVMKRGSTPQTCKR
Sequences:
>Translated_146_residues MALRRTVWVSVFPLLAILAACVPQDGAPKAANIVSPAPAQQSVASAAPSASAPPAPPTKITTDLTAPRSMVGTATYGCGN GSAITIQNLGSSLRVIEPNGATEEFAASPANQSSRYQEAATHNAIVIDGREALVMKRGSTPQTCKR >Mature_145_residues ALRRTVWVSVFPLLAILAACVPQDGAPKAANIVSPAPAQQSVASAAPSASAPPAPPTKITTDLTAPRSMVGTATYGCGNG SAITIQNLGSSLRVIEPNGATEEFAASPANQSSRYQEAATHNAIVIDGREALVMKRGSTPQTCKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14955; Mature: 14824
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRRTVWVSVFPLLAILAACVPQDGAPKAANIVSPAPAQQSVASAAPSASAPPAPPTKI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEE TTDLTAPRSMVGTATYGCGNGSAITIQNLGSSLRVIEPNGATEEFAASPANQSSRYQEAA EECCCCCCHHHCCEEECCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHH THNAIVIDGREALVMKRGSTPQTCKR CCCEEEECCCEEEEEECCCCCHHCCC >Mature Secondary Structure ALRRTVWVSVFPLLAILAACVPQDGAPKAANIVSPAPAQQSVASAAPSASAPPAPPTKI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEE TTDLTAPRSMVGTATYGCGNGSAITIQNLGSSLRVIEPNGATEEFAASPANQSSRYQEAA EECCCCCCHHHCCEEECCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHH THNAIVIDGREALVMKRGSTPQTCKR CCCEEEECCCEEEEEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA