| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473598
Identifier: 13473598
GI number: 13473598
Start: 3392287
End: 3392814
Strand: Reverse
Name: 13473598
Synonym: mll4252
Alternate gene names: NA
Gene position: 3392814-3392287 (Counterclockwise)
Preceding gene: 13473599
Following gene: 13473596
Centisome position: 48.22
GC content: 65.53
Gene sequence:
>528_bases ATGCCTTTCCTGATTGCTGTCCTTGGCGTGCTGGGAGCGGCGGCGTTCTGGTGGTATCGGATGAAGGCCATGAACGACGC CGCGCGCGAGGTCGCCGATGTCGTCGGGCGCGTGCAAGGCAACATCAGGCGCAAGAAGCTGCGCAAGCAGGCGGCCCTAT CGCCGCTGACGGCGATCGACGATCCGGTGGTGGCCGCCGCGACGCTGATCACCGCGATCGTTTCCGAGAACGGCCCCGTG CTGCCGCAGCGCGAGGCCGTCATCCGCGCGGTGATCTCCGAGATCGCCGACAAGAAGAAGACCGACGAGGCGGTGATCTA CGCCAAATGGGCGGCGGCGCAGATCGATGACACCACGATCGTCATCGACAAGCTGGCGCCGTTCCTGCGCGAACGTCTCG ACGTCGCCGAGCGCAACGATCTGCTGCAGATGGTCAATCGCGCGGCCCAGGGCGGCGAGAAGAAACTGGAGATAGCCGAC CAGCGCATGCTGCGGCTGCGGCAGAAGCTGGGCTTCGAGGTCAACTGA
Upstream 100 bases:
>100_bases CAGCCGCAAATTGAATTTTCTTCGCCGCAGGCAACCCGCGCGTGTTGAAGCAGCGCGACAGTTCTCCTATCGTCGCGCGG GATTACTGGGGGACTACCAC
Downstream 100 bases:
>100_bases TCGCACACCTGGCGATTGGCGGAAACGACCATCGCTTCGTTGGGTGCGCCAGTGAGGCGCTCAGATCGCCTCGCCTTTCA GCAGCCTCGGCGTGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPFLIAVLGVLGAAAFWWYRMKAMNDAAREVADVVGRVQGNIRRKKLRKQAALSPLTAIDDPVVAAATLITAIVSENGPV LPQREAVIRAVISEIADKKKTDEAVIYAKWAAAQIDDTTIVIDKLAPFLRERLDVAERNDLLQMVNRAAQGGEKKLEIAD QRMLRLRQKLGFEVN
Sequences:
>Translated_175_residues MPFLIAVLGVLGAAAFWWYRMKAMNDAAREVADVVGRVQGNIRRKKLRKQAALSPLTAIDDPVVAAATLITAIVSENGPV LPQREAVIRAVISEIADKKKTDEAVIYAKWAAAQIDDTTIVIDKLAPFLRERLDVAERNDLLQMVNRAAQGGEKKLEIAD QRMLRLRQKLGFEVN >Mature_174_residues PFLIAVLGVLGAAAFWWYRMKAMNDAAREVADVVGRVQGNIRRKKLRKQAALSPLTAIDDPVVAAATLITAIVSENGPVL PQREAVIRAVISEIADKKKTDEAVIYAKWAAAQIDDTTIVIDKLAPFLRERLDVAERNDLLQMVNRAAQGGEKKLEIADQ RMLRLRQKLGFEVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19388; Mature: 19257
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLIAVLGVLGAAAFWWYRMKAMNDAAREVADVVGRVQGNIRRKKLRKQAALSPLTAID CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC DPVVAAATLITAIVSENGPVLPQREAVIRAVISEIADKKKTDEAVIYAKWAAAQIDDTTI CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCHHH VIDKLAPFLRERLDVAERNDLLQMVNRAAQGGEKKLEIADQRMLRLRQKLGFEVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PFLIAVLGVLGAAAFWWYRMKAMNDAAREVADVVGRVQGNIRRKKLRKQAALSPLTAID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC DPVVAAATLITAIVSENGPVLPQREAVIRAVISEIADKKKTDEAVIYAKWAAAQIDDTTI CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCHHH VIDKLAPFLRERLDVAERNDLLQMVNRAAQGGEKKLEIADQRMLRLRQKLGFEVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA