| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473591
Identifier: 13473591
GI number: 13473591
Start: 3383190
End: 3383879
Strand: Reverse
Name: 13473591
Synonym: mll4242
Alternate gene names: NA
Gene position: 3383879-3383190 (Counterclockwise)
Preceding gene: 13473592
Following gene: 13473590
Centisome position: 48.09
GC content: 59.86
Gene sequence:
>690_bases GTGACCGACATGAAAAACGATCTTTCCAAGCTCAGCGATTTTGCCCCGACCCGCCGCCAGCTCCTCGGCCTCGGCCTTGT CGCTGCCGGTGCGGCCGCCTTCAACGTGGTGCCCGGGTTCGAGCTTCTGGCCTCGGCGCAGGCGGCGGTGCCCGCCGCCG CGCAGAAGATCGCCGACCATTTTTCCTCGGTCAAATCGATGAGCGGCGAATTCGTGCAGTTCGGCCCTAAGGGCGAGCAG ACCGGTGGCAAATTCTTCCTCGAGCGGCCGGGCAAGATCCGCTTCAACTATGACGGGGCGTCGAATTTCAAGGTGATCTC CGACGGCAAGTCGGTGGTCATCCTCAACAAGAAAATGAACACGTCGGACCTTTATCCGTTGTCGAAGACGCCGCTGAAGC TGCTGCTCGATGACCGGATCGACCTCTCCGGCGACCGCGTCAAAAGCGTCAAGGAAGAAGACGACCTCACCACCATCCAG CTTTCCGACAAGGCGGTGTTCGGCAACGCGCGCATCACCATGATGTTCGATCCGAAAACCTATGATCTGCGCCAGTGGAC GATCACCGACGCGCAGGGCAAGGACACGACGGTGATGATCTTCAACACCAAGGAAGGCGTCAGCTTCGCGCCCGACACCT TTGCCATCGACTATACGGCGAACCGCGAGCTGAACACCAAGACAAGATAG
Upstream 100 bases:
>100_bases ACCCTCTGGCGCGTTCAAGCAATTAAGCAGCGTTCGCCCCGCCAAACTTCAGCCCAACTGGGGGTTCAGGACAGCGACAG ATACAGGAATCACCACGAGA
Downstream 100 bases:
>100_bases CTCCCGTCGCTACGGCAAGTTTGCGGGGGCGGCGCTGAAACCAGCTTCTTTCTCCCCGTTTACGGGGAGAAATGCCCGGC AGGGCAATGAAGGGGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein-Sorting Protein; LolA Type Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoproteins Carrier Protein; Signal Peptide; LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein Lola; LolA Family Outer Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTDMKNDLSKLSDFAPTRRQLLGLGLVAAGAAAFNVVPGFELLASAQAAVPAAAQKIADHFSSVKSMSGEFVQFGPKGEQ TGGKFFLERPGKIRFNYDGASNFKVISDGKSVVILNKKMNTSDLYPLSKTPLKLLLDDRIDLSGDRVKSVKEEDDLTTIQ LSDKAVFGNARITMMFDPKTYDLRQWTITDAQGKDTTVMIFNTKEGVSFAPDTFAIDYTANRELNTKTR
Sequences:
>Translated_229_residues MTDMKNDLSKLSDFAPTRRQLLGLGLVAAGAAAFNVVPGFELLASAQAAVPAAAQKIADHFSSVKSMSGEFVQFGPKGEQ TGGKFFLERPGKIRFNYDGASNFKVISDGKSVVILNKKMNTSDLYPLSKTPLKLLLDDRIDLSGDRVKSVKEEDDLTTIQ LSDKAVFGNARITMMFDPKTYDLRQWTITDAQGKDTTVMIFNTKEGVSFAPDTFAIDYTANRELNTKTR >Mature_228_residues TDMKNDLSKLSDFAPTRRQLLGLGLVAAGAAAFNVVPGFELLASAQAAVPAAAQKIADHFSSVKSMSGEFVQFGPKGEQT GGKFFLERPGKIRFNYDGASNFKVISDGKSVVILNKKMNTSDLYPLSKTPLKLLLDDRIDLSGDRVKSVKEEDDLTTIQL SDKAVFGNARITMMFDPKTYDLRQWTITDAQGKDTTVMIFNTKEGVSFAPDTFAIDYTANRELNTKTR
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25135; Mature: 25004
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMKNDLSKLSDFAPTRRQLLGLGLVAAGAAAFNVVPGFELLASAQAAVPAAAQKIADH CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH FSSVKSMSGEFVQFGPKGEQTGGKFFLERPGKIRFNYDGASNFKVISDGKSVVILNKKMN HHHHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCEEEEEECCCC TSDLYPLSKTPLKLLLDDRIDLSGDRVKSVKEEDDLTTIQLSDKAVFGNARITMMFDPKT CCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEECCCEEECCEEEEEEECCCC YDLRQWTITDAQGKDTTVMIFNTKEGVSFAPDTFAIDYTANRELNTKTR CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TDMKNDLSKLSDFAPTRRQLLGLGLVAAGAAAFNVVPGFELLASAQAAVPAAAQKIADH CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH FSSVKSMSGEFVQFGPKGEQTGGKFFLERPGKIRFNYDGASNFKVISDGKSVVILNKKMN HHHHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCEEEEEECCCC TSDLYPLSKTPLKLLLDDRIDLSGDRVKSVKEEDDLTTIQLSDKAVFGNARITMMFDPKT CCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEECCCEEECCEEEEEEECCCC YDLRQWTITDAQGKDTTVMIFNTKEGVSFAPDTFAIDYTANRELNTKTR CCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA