| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473582
Identifier: 13473582
GI number: 13473582
Start: 3377341
End: 3377997
Strand: Direct
Name: 13473582
Synonym: mlr4229
Alternate gene names: NA
Gene position: 3377341-3377997 (Clockwise)
Preceding gene: 13473581
Following gene: 13473583
Centisome position: 48.0
GC content: 66.97
Gene sequence:
>657_bases GTGACGGCGCTGACCCCGCACGGCGCGAAGCAATTCATCCTCGACAACACGGCACTGATGGCGCCGCCGCATGTGCCCGA GATTCGGCTGCGCCTCGCCGATGAAGCGCACGATCTTTGGCAGCGGACCGAGGACGAGCTGGTTGAGATCGGCCTGCCGC CGCCCTTCTGGGCCTTTGCCTGGGCCGGCGGCCAGGGCCTCGCCCGCTATGTCCTGGACAATCCCGACACGGTGCGGGGC AAGCGCGTGCTCGACTTCGCCTCGGGCTCCGGCCTTGTCGCCATCGCCGCCGCCAAGGCCGGCGCTGCTGAAGTAATCGC CACCGACATCGACCCGTTCTGCGCCACCGCGATCCGCCTCAACAGCGAGGCCAACGGCGTCGGGATCGACTTCCTCGGCA CGGATTGCATCGGCACCGATGCGGGCTGGGACGTGGTGCTTGCCGGTGACGTTTTCTACGACAAATCCTTCGCCGACCGC CTGATGCCATGGTTTGCGACGCTCAAGGCGCGCGGTGCCGAGATCTTCGTCGGCGATCCCGGCCGGTCGTATCTGCCGAA ATCGGGGCTGGAGCCGCTTGCGGTCTATGAGGTGGACGTCACGCGAGCGCTGGAGGATTCCCTGGTCAAGCGCACCACCG TCTGGCGCTTTGCTTGA
Upstream 100 bases:
>100_bases CCGACATGGCGCTGGTGCGGCTCGGCCGGCTTTCCGTGCAGCCGGTGACTCCGGCCGAATGGAAGGAAGTCTGCCGCATG GGCGGCCTGACGCCTGCTCC
Downstream 100 bases:
>100_bases CGCCATCGCCGAAGCGCCTGATACAAAGTCTGGAGCAATTCCAGGAAAAGTGTGTAGCGGTTTTCCGTTCGGAATTGCGT CGCAACAAAAAAGACAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Small; Methyltransferase Protein; Methyltransferase Type; SAM-Dependent Methyltransferease Protein; Methyltransferase-Like Protein; C12orf72 Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTALTPHGAKQFILDNTALMAPPHVPEIRLRLADEAHDLWQRTEDELVEIGLPPPFWAFAWAGGQGLARYVLDNPDTVRG KRVLDFASGSGLVAIAAAKAGAAEVIATDIDPFCATAIRLNSEANGVGIDFLGTDCIGTDAGWDVVLAGDVFYDKSFADR LMPWFATLKARGAEIFVGDPGRSYLPKSGLEPLAVYEVDVTRALEDSLVKRTTVWRFA
Sequences:
>Translated_218_residues MTALTPHGAKQFILDNTALMAPPHVPEIRLRLADEAHDLWQRTEDELVEIGLPPPFWAFAWAGGQGLARYVLDNPDTVRG KRVLDFASGSGLVAIAAAKAGAAEVIATDIDPFCATAIRLNSEANGVGIDFLGTDCIGTDAGWDVVLAGDVFYDKSFADR LMPWFATLKARGAEIFVGDPGRSYLPKSGLEPLAVYEVDVTRALEDSLVKRTTVWRFA >Mature_217_residues TALTPHGAKQFILDNTALMAPPHVPEIRLRLADEAHDLWQRTEDELVEIGLPPPFWAFAWAGGQGLARYVLDNPDTVRGK RVLDFASGSGLVAIAAAKAGAAEVIATDIDPFCATAIRLNSEANGVGIDFLGTDCIGTDAGWDVVLAGDVFYDKSFADRL MPWFATLKARGAEIFVGDPGRSYLPKSGLEPLAVYEVDVTRALEDSLVKRTTVWRFA
Specific function: Unknown
COG id: COG3897
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209529731, Length=226, Percent_Identity=37.6106194690265, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI209529729, Length=226, Percent_Identity=37.6106194690265, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI28603834, Length=226, Percent_Identity=37.6106194690265, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI115533699, Length=213, Percent_Identity=33.8028169014084, Blast_Score=117, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23574; Mature: 23443
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALTPHGAKQFILDNTALMAPPHVPEIRLRLADEAHDLWQRTEDELVEIGLPPPFWAFA CCCCCCCCCCEEEECCCEEECCCCCCCEEEEEHHHHHHHHHCCCCCEEEECCCCCCCEEE WAGGQGLARYVLDNPDTVRGKRVLDFASGSGLVAIAAAKAGAAEVIATDIDPFCATAIRL EECCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHEEEEEE NSEANGVGIDFLGTDCIGTDAGWDVVLAGDVFYDKSFADRLMPWFATLKARGAEIFVGDP CCCCCCEEEEEECCCCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHCCCCEEEEECC GRSYLPKSGLEPLAVYEVDVTRALEDSLVKRTTVWRFA CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure TALTPHGAKQFILDNTALMAPPHVPEIRLRLADEAHDLWQRTEDELVEIGLPPPFWAFA CCCCCCCCCEEEECCCEEECCCCCCCEEEEEHHHHHHHHHCCCCCEEEECCCCCCCEEE WAGGQGLARYVLDNPDTVRGKRVLDFASGSGLVAIAAAKAGAAEVIATDIDPFCATAIRL EECCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCCHHHEEEEEE NSEANGVGIDFLGTDCIGTDAGWDVVLAGDVFYDKSFADRLMPWFATLKARGAEIFVGDP CCCCCCEEEEEECCCCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHCCCCEEEEECC GRSYLPKSGLEPLAVYEVDVTRALEDSLVKRTTVWRFA CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA