| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473574
Identifier: 13473574
GI number: 13473574
Start: 3369428
End: 3371023
Strand: Reverse
Name: 13473574
Synonym: mll4218
Alternate gene names: NA
Gene position: 3371023-3369428 (Counterclockwise)
Preceding gene: 13473575
Following gene: 13473573
Centisome position: 47.91
GC content: 68.86
Gene sequence:
>1596_bases ATGATCCGCCTGCTCGCCTTCCTCATCGTCGTCTTCGCGCTCGGGCTCGGCTTTGCCTGGCTGGCCGACCGGCCCGGCGA CATGGTCGTCACCTTCAACGGCTATCAGTACCAGGTCAGCCTGATGGTGGCGGCGGTGGCCATCGTCGCCGTGGTCGCCG CGGTGATGATCCTGTGGTGGCTGATCAGGTCGCTGTGGAACAGTCCCTACACCATATCGCGCTATTTCCGCGTGCGCCGC CGCGACCGCGGCTACCAGGCGCTGTCGACCGGCATGATCGCCGCCGGCGCCGGCGACGGCGCGCTGGCCCGCAAGAAGAC CAAGGAAGCGGCCAAGCTGATCCGTTCCGACCAGGAACCGCTGATCCATCTGCTCGAGGCGCAGGCGTCGCTGCTCGAAG GCGACCATGAAGGGGCGCGCCAGAAATTCGAGAGCATGCTCGACGATCCCGAAATGCGGCTGCTCGGCCTGCGCGGGCTT TATCTCGAAGCCGAACGGCTGGGCGACCGCAATGCCGCCCGGCACTATGCCGGCCGAGCCGCCGCCGTTGCGCCGCAGCT GGCCTGGGCGGCCGAATCGACGCTGGAGGAATTGACCGCGCGCGGCGACTGGGACGGCGCCCTGAAGCTGGTCGACGCGC AGAAATCGACACGGCAGATCGAGCGTGACGCCGCCAACCGCCGCCGCGCCGTGCTGTTGACCGCCAAGGCGCAGTCGCTT GCCGACAGCGATCCCAATGCGGCAAGAACCGCGGCGCTAGAGGCCAACAAGCTGCAGCCGGATTTCGCCCCCGCCGCCGT TGCCGCCGCCGCGGCGCTGTTCAAGCAGAACGATGTGCGCAAGGGCTCGAAGATCCTGGAGACCGCCTGGAGGGCGGAAC CGCATCCGGAGATCGCGGAGCTCTACACCCACGCCCGTCCGGGTGACGCCGTGCTCGACCGGCTCAACCGGGCGAAGAAG CTGCAGGAGATGAAGAAGAACCACGCCGAATCGTCGATGACCGTGGCGCGGGCCGCGCTCGATGCGCAGGATTTCTCGAC CGCCCGCAGCGAGGCCGAGGCAGCGATCCGGATGGACCGCCGCGAGGGCGCCTATCTGCTTTTGGCCGACATCGAGGAGG CTGAGACCGGCGACCAGGGCAAGGTGCGGCAGCTGCTCTCCAAGGCGGTGCGGGCGCCGCGCGATCCGGCCTGGGTCGCC GATGGCGTCGTGTCGGAACGCTGGGCGCCGGTATCGCCGGTCACCGGACGGCTCGACGCCTTCGAATGGCGCGCGCCGAT GGAGCGGCTTGGCCAGTTGATCGACAGCCGCGACGAGGGGACCACGGTGCCGGTGATAGAGGCGCTGGCGAAACCGGCCA GCGAGAAGCCGATCGACGCGATCGAGCCTGTCGCGGCGGGCAGCGAGACAACGGGCAAGGGAACCGATAGAAGCGAAGAC CAGGTCACGCCGGTGACGGCGGCTGCGTTCGCGGCGGTGCCGGCCGATGCCGAGGCCGTCGAGCCGGCGGAAGAACTGAC GCGGCTGCCCGACGATCCGGGCGTCGATCCGGACGAGGAAGCGGAAAAATCGCCGCGCCGTTTCCGGCTGTTTTGA
Upstream 100 bases:
>100_bases GCCGGTGCCGACTTTGCCGGCAAACTGAAGGCGCGCATCGAGGTCGAAACCCAGGTCGACGCGCTGATCTCCGGCGCGAT GAAGGCATGAGGGCAACACG
Downstream 100 bases:
>100_bases TTTTGGCCTTCGGGTGATTGACTTGGCCCTTGGGCCGTTTGGGAATAGATTGATGTTCGAACGCGTTCTGTCGTTTCTCA GGGATTTGCCGGCCGGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Hemy Domain Protein; Signal Peptide; HemY Domain Membrane Protein
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWWLIRSLWNSPYTISRYFRVRR RDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEPLIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGL YLEAERLGDRNAARHYAGRAAAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL ADSDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIAELYTHARPGDAVLDRLNRAKK LQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMDRREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA DGVVSERWAPVSPVTGRLDAFEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRSED QVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPDEEAEKSPRRFRLF
Sequences:
>Translated_531_residues MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWWLIRSLWNSPYTISRYFRVRR RDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEPLIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGL YLEAERLGDRNAARHYAGRAAAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL ADSDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIAELYTHARPGDAVLDRLNRAKK LQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMDRREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA DGVVSERWAPVSPVTGRLDAFEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRSED QVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPDEEAEKSPRRFRLF >Mature_531_residues MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWWLIRSLWNSPYTISRYFRVRR RDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEPLIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGL YLEAERLGDRNAARHYAGRAAAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL ADSDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIAELYTHARPGDAVLDRLNRAKK LQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMDRREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA DGVVSERWAPVSPVTGRLDAFEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRSED QVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPDEEAEKSPRRFRLF
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57966; Mature: 57966
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW CHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP HHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCHH LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHHCCHHHHHHHCCCH AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL HHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHCCCEEEEEEECHHHH ADSDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIAE CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMDR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC REGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVADGVVSERWAPVSPVTGRLDA CCCCEEEEEECHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCH FEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRSED HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC QVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPDEEAEKSPRRFRLF CCCHHHHHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW CHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP HHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCHH LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHHCCHHHHHHHCCCH AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL HHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHCCCEEEEEEECHHHH ADSDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIAE CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMDR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC REGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVADGVVSERWAPVSPVTGRLDA CCCCEEEEEECHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCH FEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRSED HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC QVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPDEEAEKSPRRFRLF CCCHHHHHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA