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The map label for this gene is tonB [H]

Identifier: 13473528

GI number: 13473528

Start: 3323907

End: 3324677

Strand: Reverse

Name: tonB [H]

Synonym: mll4165

Alternate gene names: 13473528

Gene position: 3324677-3323907 (Counterclockwise)

Preceding gene: 13473529

Following gene: 13473527

Centisome position: 47.25

GC content: 68.48

Gene sequence:

>771_bases
ATGGTACCGATGGTGGTGACGCCGGCCGTGCCCGAACAGGCCGCTATGCTGGATGCGGCGATGCCCGATGAGGCGGAACC
CGTCGAGGAGGCCGAGAGGGTCGCCGAAGGCGAGCCCGAGAAAGTGCCCGAACAGACCGAGCCGGCCGCCGAGCAACCGG
AAACGGCGCCGCCCGATGAGGTCCGGCCGACCGAGACAGCCAAGGCCGAACCGGTCGACCAGCCGCCGCCGGACGAGGTC
ATTCCCGACATCGTCGAGGCCGTGACGCCAGAGGTCGTCGTTCCGCTGCCGCGGCCGAAGCTGGTCGAGGAACCCAGGGA
AAAGAAACCGGTCCAGGCCAAGGTGAAAAAACCGGCCGAACAGCCCAAGCCGCGGCCAAGGAAGGAAAAGGCCGAGCCGG
CAAGGACGGTTGCCACCGCAAGCGCGCAGACAAGGCCGGCGGCCAGGACGGCCGCGCCGAAATCGGCTGCGGGGTTCTCG
GGTGTCAGCCCGGCCAAGTGGGAATCCCGGCTGGCGGCATGGATCAACCGGCACAAGCGTTATCCCAGTGCGGCGAAATC
CAGGGGAGCGCAGGGCAATGTGAACGTGACCTTCACGGTGGACGCATCCGGCCAAGTGCAATCGGCGCGCGTGGCCCGTT
CTTCAGGCGATCCTGACCTCGACCGCGCCGCGCTGGCCGTGCTGCAAGGCGCAACGGTGCCGGCACCTCCGCCGGAGCTC
GGCGCGCGCGTCAGCCGCACGGCGCCCTTCGTGTTCAATTTGCGGGATTAA

Upstream 100 bases:

>100_bases
GGCGGCGCTGGTGCTCGGCGCCCATGTCGCGGTCGCCTATGCGGTGCAGAGCTTCAGTCCGGTCGAGACGGATGGCGGGC
CGCCGGCCCCGGTGATCGAA

Downstream 100 bases:

>100_bases
GCAAGGGCCGGCCAGATGCCGGTGCTGCCCGATCTTTGTACGAATAGCAGTCAATGGCTCATCGACTGGCACAGCGCTTC
GACCTGCTCCAGGTAGAAAC

Product: energy transducer TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVPMVVTPAVPEQAAMLDAAMPDEAEPVEEAERVAEGEPEKVPEQTEPAAEQPETAPPDEVRPTETAKAEPVDQPPPDEV
IPDIVEAVTPEVVVPLPRPKLVEEPREKKPVQAKVKKPAEQPKPRPRKEKAEPARTVATASAQTRPAARTAAPKSAAGFS
GVSPAKWESRLAAWINRHKRYPSAAKSRGAQGNVNVTFTVDASGQVQSARVARSSGDPDLDRAALAVLQGATVPAPPPEL
GARVSRTAPFVFNLRD

Sequences:

>Translated_256_residues
MVPMVVTPAVPEQAAMLDAAMPDEAEPVEEAERVAEGEPEKVPEQTEPAAEQPETAPPDEVRPTETAKAEPVDQPPPDEV
IPDIVEAVTPEVVVPLPRPKLVEEPREKKPVQAKVKKPAEQPKPRPRKEKAEPARTVATASAQTRPAARTAAPKSAAGFS
GVSPAKWESRLAAWINRHKRYPSAAKSRGAQGNVNVTFTVDASGQVQSARVARSSGDPDLDRAALAVLQGATVPAPPPEL
GARVSRTAPFVFNLRD
>Mature_256_residues
MVPMVVTPAVPEQAAMLDAAMPDEAEPVEEAERVAEGEPEKVPEQTEPAAEQPETAPPDEVRPTETAKAEPVDQPPPDEV
IPDIVEAVTPEVVVPLPRPKLVEEPREKKPVQAKVKKPAEQPKPRPRKEKAEPARTVATASAQTRPAARTAAPKSAAGFS
GVSPAKWESRLAAWINRHKRYPSAAKSRGAQGNVNVTFTVDASGQVQSARVARSSGDPDLDRAALAVLQGATVPAPPPEL
GARVSRTAPFVFNLRD

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 27266; Mature: 27266

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPMVVTPAVPEQAAMLDAAMPDEAEPVEEAERVAEGEPEKVPEQTEPAAEQPETAPPDE
CCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
VRPTETAKAEPVDQPPPDEVIPDIVEAVTPEVVVPLPRPKLVEEPREKKPVQAKVKKPAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHCCHHHCCCHHHHHHCCCC
QPKPRPRKEKAEPARTVATASAQTRPAARTAAPKSAAGFSGVSPAKWESRLAAWINRHKR
CCCCCCCHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
YPSAAKSRGAQGNVNVTFTVDASGQVQSARVARSSGDPDLDRAALAVLQGATVPAPPPEL
CCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHH
GARVSRTAPFVFNLRD
CCHHHCCCCEEEEECC
>Mature Secondary Structure
MVPMVVTPAVPEQAAMLDAAMPDEAEPVEEAERVAEGEPEKVPEQTEPAAEQPETAPPDE
CCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
VRPTETAKAEPVDQPPPDEVIPDIVEAVTPEVVVPLPRPKLVEEPREKKPVQAKVKKPAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHCCHHHCCCHHHHHHCCCC
QPKPRPRKEKAEPARTVATASAQTRPAARTAAPKSAAGFSGVSPAKWESRLAAWINRHKR
CCCCCCCHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
YPSAAKSRGAQGNVNVTFTVDASGQVQSARVARSSGDPDLDRAALAVLQGATVPAPPPEL
CCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHH
GARVSRTAPFVFNLRD
CCHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]