Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 13473523

GI number: 13473523

Start: 3320079

End: 3320504

Strand: Reverse

Name: yggT [C]

Synonym: mll4156

Alternate gene names: 13473523

Gene position: 3320504-3320079 (Counterclockwise)

Preceding gene: 13473527

Following gene: 13473522

Centisome position: 47.19

GC content: 60.09

Gene sequence:

>426_bases
GTGGCGCATTTATCGGGCGCGGCTGATTTCTGTCAAGGCGGCATTGCCGAAATCCTCGTTGCCTGGCGCGCGGGCTGCCG
GCCCTTGCCGGCTTCGTGCGCAATGGCTACATGTCGGCAACAATTGGAGACCGGCATGCTCGCCCTCATTCAAACCATCG
TCATGGCGCTTGACCTCTATTGGTGGATCATCATCGCCTCGGCGATCTTTTCCTGGCTCTACGCCTTCAATGTCGTCAAT
TCGCGCAACCAGTTCGTCGGCAGCATCGGCAACATGCTCTACCGGCTGACTGAGCCGGCGCTGCGGCCGATCCGTCGCTT
CATGCCGGACCTTGGCGGCATCGACATCTCGCCGATCATCCTGCTCTTGATCCTGTTCTTCGTCAGGCAGTTCATCCTCA
CCACGGTGGCGCCGCTGGTGCTTTGA

Upstream 100 bases:

>100_bases
ACCGATCACTTTGCTGGTGGAGCTGAGGGGGATCGAACCCCTGACCTCATCATTGCGAACGATGCGCTCTCCCAGCTGAG
CTACAGCCCCGTTCCAGCAA

Downstream 100 bases:

>100_bases
GCCCGGTGATCGCATGAGCGCGCCGCTCCGCATCCGCGAGAACGGCATCGACCTGTTCGTGCGGCTGACGCCAAAATCTT
CCCTGGACAGGTTGGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAHLSGAADFCQGGIAEILVAWRAGCRPLPASCAMATCRQQLETGMLALIQTIVMALDLYWWIIIASAIFSWLYAFNVVN
SRNQFVGSIGNMLYRLTEPALRPIRRFMPDLGGIDISPIILLLILFFVRQFILTTVAPLVL

Sequences:

>Translated_141_residues
MAHLSGAADFCQGGIAEILVAWRAGCRPLPASCAMATCRQQLETGMLALIQTIVMALDLYWWIIIASAIFSWLYAFNVVN
SRNQFVGSIGNMLYRLTEPALRPIRRFMPDLGGIDISPIILLLILFFVRQFILTTVAPLVL
>Mature_140_residues
AHLSGAADFCQGGIAEILVAWRAGCRPLPASCAMATCRQQLETGMLALIQTIVMALDLYWWIIIASAIFSWLYAFNVVNS
RNQFVGSIGNMLYRLTEPALRPIRRFMPDLGGIDISPIILLLILFFVRQFILTTVAPLVL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 15659; Mature: 15528

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLSGAADFCQGGIAEILVAWRAGCRPLPASCAMATCRQQLETGMLALIQTIVMALDLY
CCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WWIIIASAIFSWLYAFNVVNSRNQFVGSIGNMLYRLTEPALRPIRRFMPDLGGIDISPII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LLLILFFVRQFILTTVAPLVL
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AHLSGAADFCQGGIAEILVAWRAGCRPLPASCAMATCRQQLETGMLALIQTIVMALDLY
CCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WWIIIASAIFSWLYAFNVVNSRNQFVGSIGNMLYRLTEPALRPIRRFMPDLGGIDISPII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LLLILFFVRQFILTTVAPLVL
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]