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The map label for this gene is lemA [H]

Identifier: 13473507

GI number: 13473507

Start: 3303558

End: 3304196

Strand: Reverse

Name: lemA [H]

Synonym: mll4130

Alternate gene names: 13473507

Gene position: 3304196-3303558 (Counterclockwise)

Preceding gene: 13471342

Following gene: 13473506

Centisome position: 46.96

GC content: 63.69

Gene sequence:

>639_bases
ATGCTCGCCCAGCGCCTTGCTCGACCATCGACATTCCGCACGCTGCCTGCCCTCCTGATGATGGCAATCGTGCTGCCGTT
GCTTGCCGGCTGCGGCTACAACACGATCCCGACGGCGGAGGAAAACGCCAAGGCGGCCTGGAGCGAGGTGCTGAACCAGT
ATCAGCGCCGCGCCGACCTCATCCCCAATCTGGTCGAGACGGTCAAAGGCTATGCCTCGCATGAAAAGGACACGCTGGAC
GCGGTTGTCGAGGCACGCGCCAAGGCGACACAGATCACGGTGACGCCGGATACGCTGAAGGATCCCGAAGCCCTCAAGAA
GTTCCAGGATGCCCAGGCCGGGCTGACCAGCGCGCTGTCGCGGCTGATCGCGGTGTCGGAGGCCTACCCCGACCTGAAGG
CCAACCAGAATTTTCTGGCGCTGCAGGCGCAGCTCGAGGGCACCGAGAACCGCATCGCGGTGGCGCGGCGCGACTACATC
CAGGCGGTCAGGGATTATAATCTGACGCTGAAAACCTTCCCGTCGGTGCTGTGGGCGACCTTCTGGTTCCGCAGCAACGA
GCCCTTCGCCACCTTCACCGTCGACGAAGACAAGATGCAGCCGCCGAAGGTCGATTTCGGCACGAAGCAGGGCGGGTGA

Upstream 100 bases:

>100_bases
AAGGCAATATTCGCCGTCGCTGGTCCAGGGGCAGGGGCCGTTTTCTTGCGCGCTGATTGTGGTAATGCTTCGCATGCAAC
TTCTATCGAGGGACCCCATC

Downstream 100 bases:

>100_bases
CGGCCGGGGCCAAAAGTCGTGATCTCGCGGGTCGATGACGGACGGCGTCTGGGTCGCCTTGTCGCTGTTGCGCTCTTCGT
CCTGGCGCTTCCGTTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLAQRLARPSTFRTLPALLMMAIVLPLLAGCGYNTIPTAEENAKAAWSEVLNQYQRRADLIPNLVETVKGYASHEKDTLD
AVVEARAKATQITVTPDTLKDPEALKKFQDAQAGLTSALSRLIAVSEAYPDLKANQNFLALQAQLEGTENRIAVARRDYI
QAVRDYNLTLKTFPSVLWATFWFRSNEPFATFTVDEDKMQPPKVDFGTKQGG

Sequences:

>Translated_212_residues
MLAQRLARPSTFRTLPALLMMAIVLPLLAGCGYNTIPTAEENAKAAWSEVLNQYQRRADLIPNLVETVKGYASHEKDTLD
AVVEARAKATQITVTPDTLKDPEALKKFQDAQAGLTSALSRLIAVSEAYPDLKANQNFLALQAQLEGTENRIAVARRDYI
QAVRDYNLTLKTFPSVLWATFWFRSNEPFATFTVDEDKMQPPKVDFGTKQGG
>Mature_212_residues
MLAQRLARPSTFRTLPALLMMAIVLPLLAGCGYNTIPTAEENAKAAWSEVLNQYQRRADLIPNLVETVKGYASHEKDTLD
AVVEARAKATQITVTPDTLKDPEALKKFQDAQAGLTSALSRLIAVSEAYPDLKANQNFLALQAQLEGTENRIAVARRDYI
QAVRDYNLTLKTFPSVLWATFWFRSNEPFATFTVDEDKMQPPKVDFGTKQGG

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 23549; Mature: 23549

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQRLARPSTFRTLPALLMMAIVLPLLAGCGYNTIPTAEENAKAAWSEVLNQYQRRADL
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IPNLVETVKGYASHEKDTLDAVVEARAKATQITVTPDTLKDPEALKKFQDAQAGLTSALS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RLIAVSEAYPDLKANQNFLALQAQLEGTENRIAVARRDYIQAVRDYNLTLKTFPSVLWAT
HHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FWFRSNEPFATFTVDEDKMQPPKVDFGTKQGG
HHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAQRLARPSTFRTLPALLMMAIVLPLLAGCGYNTIPTAEENAKAAWSEVLNQYQRRADL
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IPNLVETVKGYASHEKDTLDAVVEARAKATQITVTPDTLKDPEALKKFQDAQAGLTSALS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RLIAVSEAYPDLKANQNFLALQAQLEGTENRIAVARRDYIQAVRDYNLTLKTFPSVLWAT
HHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FWFRSNEPFATFTVDEDKMQPPKVDFGTKQGG
HHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]