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The map label for this gene is xylF [H]

Identifier: 13472348

GI number: 13472348

Start: 2112633

End: 2113631

Strand: Direct

Name: xylF [H]

Synonym: mlr2612

Alternate gene names: 13472348

Gene position: 2112633-2113631 (Clockwise)

Preceding gene: 13472347

Following gene: 13472349

Centisome position: 30.03

GC content: 64.96

Gene sequence:

>999_bases
ATGCGTCGGTTGATCCGCATCGTCGGCTGGCTCGCGGTCACGCTGGTCGTGCTCATTGTGGTCGTGCTTGCTGGCTTTCG
CGGCGCGGCGGCGCTGCGAGAGAACCGGTCGCCCGAGGAGGCAGCCCCGGCGGGAGCGCTGTTTGCCACAGTGGATGGCC
TGAAGATACACTATCAGGTCTGGGGACCCCTGGACGGACCGCCGCTGCTCCTGTTCCACGGCACCGCCTCCTGGGCCGAG
ACATACCGCGATATCGCCGCGCCGTTGGGAGAACAGGGCTTTCGCGTCATAGCGCCCGACATGCCTCCCTTTGGCTATTC
GCAAAGACCGGCCGACCAGGATTATTCGCGCGCCGCCCACGCAAAACGCGTCCTCGGTTTCGCCGACGCTCTCGGCCTGC
GCCATTTCAGCGTCGGTGTCCACTCCTATGGCGGCGGCGGCGTGATCGAAGCCGCCTTCTCGGCCCCGGCTCGCATCGAC
TCGCTGATCCTGCTCGATGTCGCCATTGGCCTCGGCCAGACCGAGGCACCGGCCTTGCCGTTGGCATCCCTGCTCGACAG
GGACTGGCCGCGCCAGTTGCTGACCGCGTCGACCTTCACCAATCCGCTGATGACCGGCCCTGGCCTGCGCAAATTCGTTG
AAAACGACGATCTCGTCACGGCGGAGCGCATTGCGATCTACACGCGCCCTTTGAACGTCAAGGGCACCACCAATGCCGTT
GGCCATTGGCTGGTCAGCGGGCTCTACCATGACGAGCGCAAATCGCTTGCCGCCGACAAGGCGAATTACCGCGCCTTCAC
GCCGCCCGTTCTCGTCATCTGGGGACGAGACGATTCAACCACGCCCCTCGCGCAGGGCGAAGAGATCGCCTCGCTGTTTG
CGCATGCCGAGCTGGCCGTTCTCGATGGCGTCAACCACATCCCTCAGGTCGAGCGCCCGCACGATGTGGTGCGGCTGATC
GGCAATTTCCTCAAACGGACCTTGCCGGCCGCTCGATAA

Upstream 100 bases:

>100_bases
GGTCGTGGCCGTACGCAAGCTGCATCTCGTGCTGCCGGCTCTGATCAAGTCAGGCGCCAGGCTCGAACACGTCTATGACT
ATTGAGACGATGGCCTGGAA

Downstream 100 bases:

>100_bases
GCGCGCGCCGCCATGCTCATTCCACAATCGCGGCCAAATCCCGCCTTGTTCGCGCGCGATGGAATGGTGCATGTTGCCTG
ACGGGCGACATACCTGAATG

Product: hydroxymuconic semialdehyde hydrolase

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRRLIRIVGWLAVTLVVLIVVVLAGFRGAAALRENRSPEEAAPAGALFATVDGLKIHYQVWGPLDGPPLLLFHGTASWAE
TYRDIAAPLGEQGFRVIAPDMPPFGYSQRPADQDYSRAAHAKRVLGFADALGLRHFSVGVHSYGGGGVIEAAFSAPARID
SLILLDVAIGLGQTEAPALPLASLLDRDWPRQLLTASTFTNPLMTGPGLRKFVENDDLVTAERIAIYTRPLNVKGTTNAV
GHWLVSGLYHDERKSLAADKANYRAFTPPVLVIWGRDDSTTPLAQGEEIASLFAHAELAVLDGVNHIPQVERPHDVVRLI
GNFLKRTLPAAR

Sequences:

>Translated_332_residues
MRRLIRIVGWLAVTLVVLIVVVLAGFRGAAALRENRSPEEAAPAGALFATVDGLKIHYQVWGPLDGPPLLLFHGTASWAE
TYRDIAAPLGEQGFRVIAPDMPPFGYSQRPADQDYSRAAHAKRVLGFADALGLRHFSVGVHSYGGGGVIEAAFSAPARID
SLILLDVAIGLGQTEAPALPLASLLDRDWPRQLLTASTFTNPLMTGPGLRKFVENDDLVTAERIAIYTRPLNVKGTTNAV
GHWLVSGLYHDERKSLAADKANYRAFTPPVLVIWGRDDSTTPLAQGEEIASLFAHAELAVLDGVNHIPQVERPHDVVRLI
GNFLKRTLPAAR
>Mature_332_residues
MRRLIRIVGWLAVTLVVLIVVVLAGFRGAAALRENRSPEEAAPAGALFATVDGLKIHYQVWGPLDGPPLLLFHGTASWAE
TYRDIAAPLGEQGFRVIAPDMPPFGYSQRPADQDYSRAAHAKRVLGFADALGLRHFSVGVHSYGGGGVIEAAFSAPARID
SLILLDVAIGLGQTEAPALPLASLLDRDWPRQLLTASTFTNPLMTGPGLRKFVENDDLVTAERIAIYTRPLNVKGTTNAV
GHWLVSGLYHDERKSLAADKANYRAFTPPVLVIWGRDDSTTPLAQGEEIASLFAHAELAVLDGVNHIPQVERPHDVVRLI
GNFLKRTLPAAR

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 35934; Mature: 35934

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLIRIVGWLAVTLVVLIVVVLAGFRGAAALRENRSPEEAAPAGALFATVDGLKIHYQV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCEEEEEECCEEEEEEE
WGPLDGPPLLLFHGTASWAETYRDIAAPLGEQGFRVIAPDMPPFGYSQRPADQDYSRAAH
ECCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHH
AKRVLGFADALGLRHFSVGVHSYGGGGVIEAAFSAPARIDSLILLDVAIGLGQTEAPALP
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH
LASLLDRDWPRQLLTASTFTNPLMTGPGLRKFVENDDLVTAERIAIYTRPLNVKGTTNAV
HHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHEEEEEECCCCCCCCHHHH
GHWLVSGLYHDERKSLAADKANYRAFTPPVLVIWGRDDSTTPLAQGEEIASLFAHAELAV
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LDGVNHIPQVERPHDVVRLIGNFLKRTLPAAR
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRLIRIVGWLAVTLVVLIVVVLAGFRGAAALRENRSPEEAAPAGALFATVDGLKIHYQV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCEEEEEECCEEEEEEE
WGPLDGPPLLLFHGTASWAETYRDIAAPLGEQGFRVIAPDMPPFGYSQRPADQDYSRAAH
ECCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHH
AKRVLGFADALGLRHFSVGVHSYGGGGVIEAAFSAPARIDSLILLDVAIGLGQTEAPALP
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH
LASLLDRDWPRQLLTASTFTNPLMTGPGLRKFVENDDLVTAERIAIYTRPLNVKGTTNAV
HHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHEEEEEECCCCCCCCHHHH
GHWLVSGLYHDERKSLAADKANYRAFTPPVLVIWGRDDSTTPLAQGEEIASLFAHAELAV
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LDGVNHIPQVERPHDVVRLIGNFLKRTLPAAR
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1791759 [H]