Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472274
Identifier: 13472274
GI number: 13472274
Start: 2038919
End: 2039677
Strand: Direct
Name: 13472274
Synonym: mlr2514
Alternate gene names: NA
Gene position: 2038919-2039677 (Clockwise)
Preceding gene: 13472272
Following gene: 13472275
Centisome position: 28.98
GC content: 68.77
Gene sequence:
>759_bases ATGCGCATAGCCGTCCTCGCCGATATCCACGGCAACGTCCTGGCGCTCGATGCGGTGCTGGAGGATTTGGCGCGTCGCGG CGGCGCTGAGCTCACCGTCAATCTCGGCGACAGCGTTTCCGGGCCGCTCTGGCCGCGCGAGACGTTTGAGCGCCTGGAAG CGCTGAACCTGCCGACGGTGCGCGGCAACCATGACCGCCGCGTCGCGATCGATCCGGCCGATGAGACCATGTGGGCGTCC GACGTCTATGCGCAGGAGCGCCTGACGCAGGCGCAGCGCCAGGTGCTGTCCGCCCAGCCGCTGACGCTGGAGATCGCGCC CGGCATCGTCGCCTTCCATGCCCGACCCGACCATGACGAGAAATACCTGCTCGACGCGATCGTCGATGGCCAGCTGGTGC GCGCGCCGCTGGCGGCGATCAGGCGCCGGCTGAAGGCGCTCGATCCAGCCTGCCGCATCGCGCTGTGCGGCCACAGCCAC CGCCCGGAACTGATCCGCATCCCCGACGGTCCCGTCATCTTCAATCCGGGCAGCATCGGCTGCCCCGCCTATGACGATTC CACCCCGCCGGCACATGTTTCCGAACAGGGCTCGCCGCATGCGCGCTACGGCATCGTCACCTTGGGCGGCGCCGGTCGGC CCGATCGTTTCGAGACGATCGCCGTCGACTACGATCACGAAGCGGCGGCACGACAGGCCGAACAGGCGGGAAGGCCGGAA TGGGCTCACGGGCTCAAGACCGGCTTCATGCCGGGCTGA
Upstream 100 bases:
>100_bases CCGGCTGCCCCAAAAGGTGGGGACTTGATTAGAAAGGCGGCGGCTTGATAACGAAGACGGGCCGGAGTCCCGATGGGGCC GCACCATGGGAGCCCGCCGC
Downstream 100 bases:
>100_bases AGCTTGCTTCATGCCGGGCTGAAGCTTGCTTCATGCCGGGCTGAACGAAGCTCGTGCCCCAAGCGGAATGCCTTGCATGC AGCTCCCCGGCTGAGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase; DNA Repair Protein; Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase; Diadenosine Tetraphosphatase
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRIAVLADIHGNVLALDAVLEDLARRGGAELTVNLGDSVSGPLWPRETFERLEALNLPTVRGNHDRRVAIDPADETMWAS DVYAQERLTQAQRQVLSAQPLTLEIAPGIVAFHARPDHDEKYLLDAIVDGQLVRAPLAAIRRRLKALDPACRIALCGHSH RPELIRIPDGPVIFNPGSIGCPAYDDSTPPAHVSEQGSPHARYGIVTLGGAGRPDRFETIAVDYDHEAAARQAEQAGRPE WAHGLKTGFMPG
Sequences:
>Translated_252_residues MRIAVLADIHGNVLALDAVLEDLARRGGAELTVNLGDSVSGPLWPRETFERLEALNLPTVRGNHDRRVAIDPADETMWAS DVYAQERLTQAQRQVLSAQPLTLEIAPGIVAFHARPDHDEKYLLDAIVDGQLVRAPLAAIRRRLKALDPACRIALCGHSH RPELIRIPDGPVIFNPGSIGCPAYDDSTPPAHVSEQGSPHARYGIVTLGGAGRPDRFETIAVDYDHEAAARQAEQAGRPE WAHGLKTGFMPG >Mature_252_residues MRIAVLADIHGNVLALDAVLEDLARRGGAELTVNLGDSVSGPLWPRETFERLEALNLPTVRGNHDRRVAIDPADETMWAS DVYAQERLTQAQRQVLSAQPLTLEIAPGIVAFHARPDHDEKYLLDAIVDGQLVRAPLAAIRRRLKALDPACRIALCGHSH RPELIRIPDGPVIFNPGSIGCPAYDDSTPPAHVSEQGSPHARYGIVTLGGAGRPDRFETIAVDYDHEAAARQAEQAGRPE WAHGLKTGFMPG
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27378; Mature: 27378
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAVLADIHGNVLALDAVLEDLARRGGAELTVNLGDSVSGPLWPRETFERLEALNLPTV CEEEEEEECCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC RGNHDRRVAIDPADETMWASDVYAQERLTQAQRQVLSAQPLTLEIAPGIVAFHARPDHDE CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCH KYLLDAIVDGQLVRAPLAAIRRRLKALDPACRIALCGHSHRPELIRIPDGPVIFNPGSIG HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCEEECCCCCEEECCCCCC CPAYDDSTPPAHVSEQGSPHARYGIVTLGGAGRPDRFETIAVDYDHEAAARQAEQAGRPE CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCH WAHGLKTGFMPG HHHHHCCCCCCC >Mature Secondary Structure MRIAVLADIHGNVLALDAVLEDLARRGGAELTVNLGDSVSGPLWPRETFERLEALNLPTV CEEEEEEECCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC RGNHDRRVAIDPADETMWASDVYAQERLTQAQRQVLSAQPLTLEIAPGIVAFHARPDHDE CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCH KYLLDAIVDGQLVRAPLAAIRRRLKALDPACRIALCGHSHRPELIRIPDGPVIFNPGSIG HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCEEECCCCCEEECCCCCC CPAYDDSTPPAHVSEQGSPHARYGIVTLGGAGRPDRFETIAVDYDHEAAARQAEQAGRPE CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCH WAHGLKTGFMPG HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA