| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ycfT [C]
Identifier: 13472071
GI number: 13472071
Start: 1811149
End: 1812291
Strand: Reverse
Name: ycfT [C]
Synonym: mll2248
Alternate gene names: 13472071
Gene position: 1812291-1811149 (Counterclockwise)
Preceding gene: 13472072
Following gene: 13472065
Centisome position: 25.76
GC content: 64.22
Gene sequence:
>1143_bases ATGTCGCCGGATGATGGCTGGCCGCCTCGGCCGGCCCCGGATGGATTTGCCATGAACAGCCCGATGCGCATGCCGTGGGT GGACACGGCCAAAGGCCTCTCGATCATCCTCGTGGTCATGATGTACGCGGCCTACAACACGGGCGAGTACACGGGCGGCG TCGGCTTCCTGCATTATGTCATCGGCTTCGCGACGCCGTTCCGCATGCCGGAATTCTTCCTGATCTCCGGCCTGTTCCTG TCGCAGGTGATCGACCGGCCGTGGCGGCGCTACTTCGACCGGCGCGTCGTCCACCATCTCTATTTCTACGTGCTGTGGGC GATCATCTCCATCGGGTTGAAGATCGGCATCTTCAGCCGCGATCCCGGCGGCATGCTGCACGATCTCGCGATGGCCGTCG TCCAGCCTTATGGCGTGCTGTGGTTCATCTACATGCTGGCGGTGTTCGGCCTTACCGCCAAGCTCTTGCGGCAGTTTCGT GTGCCGGCCTGGATCGTCATCCCGATCGCTGCCGGACTGCAGATGTGGGCGCCGCATCCCGACAGCTATGCGGTCGAACA GTTCGCGGCCTATTTCGTGTTCTTCTATGTCGGCTTCGTCATGGCGCCGCCGGTGTTCCGGCTCGTCGAATGGACGCAGC CCCGCCCGGCGCTGGCCGTCGCCGGCCTGGCTTTATGGGCAGTTATCAACGGCCTGCTCGTCTATTCGCCGGGCTATGCC ATGCAGCCGGTCGGCATTCAGATGGGGCTGGCGGCATGGCCGCCGCTGCATCTTACTTTGGCCGTCGCCGGCGCGGTGGC GCTCTGCGTGCTTGGAGGCTTGCTCTCGACATTCCCTGTCATGGAATGGCTGCGCTGGCTCGGCGAACATTCGCTGGTCG TCTATGTCGCCTTCACCATCCCGATGTCGCTGTTCCGTGGCGCCGCACTGGCAAGCGGTATGCTGACCGACACCGGCATG CTCAGCCTGGCGGTGCTGCTGGTCTCGATCATCAGCCCTGTCGTGCTCTACCTCATCATCCAGCGCGTGGGCTTCGGCAT GTTCCTGTTCGAGCGGCCGGCCTGGGCGCATATCGACAACAGCGCGCCGCAAGCGGCACAGAGCGTGGCGCTGCCCGCCG CCGCCCAATCAAGCCGGACATAG
Upstream 100 bases:
>100_bases CCCATCGCTGTCATACTCTGTGAGTTCACGACTTAGGCGCCGCCATCCTGCCACCCCAAGACCTTCCATGTTTACGATCT GGGAAGCCTGATGGTGCTAG
Downstream 100 bases:
>100_bases TCGAGCAGCGGGAGGCCTCAGCCGTCCCGCAGCCACACCAGCATCTCGCCGGGCTCGCGGTTGTCCCAGGCGTAATAGGG GATGGCGGTCAGGCGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyltransferase Family Protein; Acyltransferase Putative; Acyltransferase; Acyltransferase 3 Family Protein
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSPDDGWPPRPAPDGFAMNSPMRMPWVDTAKGLSIILVVMMYAAYNTGEYTGGVGFLHYVIGFATPFRMPEFFLISGLFL SQVIDRPWRRYFDRRVVHHLYFYVLWAIISIGLKIGIFSRDPGGMLHDLAMAVVQPYGVLWFIYMLAVFGLTAKLLRQFR VPAWIVIPIAAGLQMWAPHPDSYAVEQFAAYFVFFYVGFVMAPPVFRLVEWTQPRPALAVAGLALWAVINGLLVYSPGYA MQPVGIQMGLAAWPPLHLTLAVAGAVALCVLGGLLSTFPVMEWLRWLGEHSLVVYVAFTIPMSLFRGAALASGMLTDTGM LSLAVLLVSIISPVVLYLIIQRVGFGMFLFERPAWAHIDNSAPQAAQSVALPAAAQSSRT
Sequences:
>Translated_380_residues MSPDDGWPPRPAPDGFAMNSPMRMPWVDTAKGLSIILVVMMYAAYNTGEYTGGVGFLHYVIGFATPFRMPEFFLISGLFL SQVIDRPWRRYFDRRVVHHLYFYVLWAIISIGLKIGIFSRDPGGMLHDLAMAVVQPYGVLWFIYMLAVFGLTAKLLRQFR VPAWIVIPIAAGLQMWAPHPDSYAVEQFAAYFVFFYVGFVMAPPVFRLVEWTQPRPALAVAGLALWAVINGLLVYSPGYA MQPVGIQMGLAAWPPLHLTLAVAGAVALCVLGGLLSTFPVMEWLRWLGEHSLVVYVAFTIPMSLFRGAALASGMLTDTGM LSLAVLLVSIISPVVLYLIIQRVGFGMFLFERPAWAHIDNSAPQAAQSVALPAAAQSSRT >Mature_379_residues SPDDGWPPRPAPDGFAMNSPMRMPWVDTAKGLSIILVVMMYAAYNTGEYTGGVGFLHYVIGFATPFRMPEFFLISGLFLS QVIDRPWRRYFDRRVVHHLYFYVLWAIISIGLKIGIFSRDPGGMLHDLAMAVVQPYGVLWFIYMLAVFGLTAKLLRQFRV PAWIVIPIAAGLQMWAPHPDSYAVEQFAAYFVFFYVGFVMAPPVFRLVEWTQPRPALAVAGLALWAVINGLLVYSPGYAM QPVGIQMGLAAWPPLHLTLAVAGAVALCVLGGLLSTFPVMEWLRWLGEHSLVVYVAFTIPMSLFRGAALASGMLTDTGML SLAVLLVSIISPVVLYLIIQRVGFGMFLFERPAWAHIDNSAPQAAQSVALPAAAQSSRT
Specific function: Unknown
COG id: COG4763
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41966; Mature: 41835
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDDGWPPRPAPDGFAMNSPMRMPWVDTAKGLSIILVVMMYAAYNTGEYTGGVGFLHYV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IGFATPFRMPEFFLISGLFLSQVIDRPWRRYFDRRVVHHLYFYVLWAIISIGLKIGIFSR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC DPGGMLHDLAMAVVQPYGVLWFIYMLAVFGLTAKLLRQFRVPAWIVIPIAAGLQMWAPHP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCHHHCCCCC DSYAVEQFAAYFVFFYVGFVMAPPVFRLVEWTQPRPALAVAGLALWAVINGLLVYSPGYA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEECCCCC MQPVGIQMGLAAWPPLHLTLAVAGAVALCVLGGLLSTFPVMEWLRWLGEHSLVVYVAFTI CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH PMSLFRGAALASGMLTDTGMLSLAVLLVSIISPVVLYLIIQRVGFGMFLFERPAWAHIDN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCC SAPQAAQSVALPAAAQSSRT CCHHHHHHHCCCCHHCCCCC >Mature Secondary Structure SPDDGWPPRPAPDGFAMNSPMRMPWVDTAKGLSIILVVMMYAAYNTGEYTGGVGFLHYV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IGFATPFRMPEFFLISGLFLSQVIDRPWRRYFDRRVVHHLYFYVLWAIISIGLKIGIFSR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC DPGGMLHDLAMAVVQPYGVLWFIYMLAVFGLTAKLLRQFRVPAWIVIPIAAGLQMWAPHP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCHHHCCCCC DSYAVEQFAAYFVFFYVGFVMAPPVFRLVEWTQPRPALAVAGLALWAVINGLLVYSPGYA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEECCCCC MQPVGIQMGLAAWPPLHLTLAVAGAVALCVLGGLLSTFPVMEWLRWLGEHSLVVYVAFTI CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH PMSLFRGAALASGMLTDTGMLSLAVLLVSIISPVVLYLIIQRVGFGMFLFERPAWAHIDN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCC SAPQAAQSVALPAAAQSSRT CCHHHHHHHCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA