Click here to switch to the map view.

The map label for this gene is ytsP [H]

Identifier: 13472055

GI number: 13472055

Start: 1797815

End: 1798312

Strand: Reverse

Name: ytsP [H]

Synonym: mll2226

Alternate gene names: 13472055

Gene position: 1798312-1797815 (Counterclockwise)

Preceding gene: 13472056

Following gene: 13472053

Centisome position: 25.56

GC content: 63.25

Gene sequence:

>498_bases
ATGTTTGCCGCCAAGGCCATCGACACCTCGGACAAGGCCGCGTTCTACAGCGACCTCGCCGCTCAGCTGAAAGCGCTGCT
CGACGGTGAGAGCGACTCGATCGCCAATGCCGCCAACACCGCGGCCCTGATCTTTCAGATGGTGCCCGACCTCAACTGGG
CCGGTTTCTATTTCCTGGCCTCTGACGAGGAGCTGGTGCTGGGGCCATTCCAGGGTAAACCGGCCTGCGTGCGCATCGCG
GTCGGCAAAGGTGTCTGCGGAACGGCGGTGCAACTCGGCACCTCGATGCTGATCAAGGACGTGCATGATTTTCCCGGCCA
CATCGCCTGCGACGCCGATTCACGTTCGGAACTGGTCGTGCTGCTTGAGGACGATGAAGGCGTCTTCGGCGTGCTCGATC
TCGACAGCCCGCTGCCCGGTCGCTTCGACAAGGCCGACCAGGCCGGCATCGAAACGCTCGCCGCGATCTATGCGGCGGCG
AGTTCGTTCGAGGACTGA

Upstream 100 bases:

>100_bases
CTTTCGCGGCGACTGGAATTCAAGCTAGTATCGTCAAGTGGTCGTTTGGTGCAGAGAGCTTGCGGAAACGCAACCGCGAT
TCTCAGTTCGGAGACAAGCC

Downstream 100 bases:

>100_bases
GCGGTCGTCATCAGGATAAGCGTTGGCGCCGTAGGGCGCTACCTCGCAAGCCTATGGCCCTGCTTTCAACGCGTGGGTAA
ACGCCCCAACCGCCATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFAAKAIDTSDKAAFYSDLAAQLKALLDGESDSIANAANTAALIFQMVPDLNWAGFYFLASDEELVLGPFQGKPACVRIA
VGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSELVVLLEDDEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAA
SSFED

Sequences:

>Translated_165_residues
MFAAKAIDTSDKAAFYSDLAAQLKALLDGESDSIANAANTAALIFQMVPDLNWAGFYFLASDEELVLGPFQGKPACVRIA
VGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSELVVLLEDDEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAA
SSFED
>Mature_165_residues
MFAAKAIDTSDKAAFYSDLAAQLKALLDGESDSIANAANTAALIFQMVPDLNWAGFYFLASDEELVLGPFQGKPACVRIA
VGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSELVVLLEDDEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAA
SSFED

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=145, Percent_Identity=53.1034482758621, Blast_Score=154, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322781, Length=161, Percent_Identity=38.5093167701863, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17336; Mature: 17336

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAKAIDTSDKAAFYSDLAAQLKALLDGESDSIANAANTAALIFQMVPDLNWAGFYFLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
SDEELVLGPFQGKPACVRIAVGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSELVV
CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
LLEDDEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAASSFED
EEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFAAKAIDTSDKAAFYSDLAAQLKALLDGESDSIANAANTAALIFQMVPDLNWAGFYFLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
SDEELVLGPFQGKPACVRIAVGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSELVV
CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
LLEDDEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAASSFED
EEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]