| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472047
Identifier: 13472047
GI number: 13472047
Start: 1791377
End: 1791895
Strand: Reverse
Name: 13472047
Synonym: mll2216
Alternate gene names: NA
Gene position: 1791895-1791377 (Counterclockwise)
Preceding gene: 13472048
Following gene: 13472046
Centisome position: 25.47
GC content: 63.78
Gene sequence:
>519_bases GTGGGGAGAGAAACCCAAGTATGTTGCAGCCCTCATCCTTGCCAATTGGCAAATACATGCTATATCTCTGCCAATAGCAG GGTGAGCAACATGCAGCTTCAGTCCATCGTCACCACGCCGGCCACGGTCGGCAGCGCCATTTCGGAAGAAGAGGCGGGCG CGCTGGCGCGCACCACGGTCAACCTGTTCAAGGCGTGGAACCTCACCGACCTCGAGGCCTGCATCCTGCTCGGCGGCATG TCGGCGCGCACTTGGGCACGTTGGAAGACTGGGGCACGCTGGAAGGAAGGCGGCATCGGCCGGATCGACCGTGACCTGCG CACCCGCATGGCGCATCTGATGGGCATCCACAAGGGCCTGCGCTATCTCTTCACCGAGCCGGCGCGCGGCTATGCCTGGA TCCGCAAGCCCAATGCCACGTTCGGCGGCCAGTCGGCGCTCGACCTGATGCTGCGCGGCGAAATCTCCGACCTTGCCGCC ATGCGCGAATGGCTCGATGCGGAGCGTGGTGCATGGTGA
Upstream 100 bases:
>100_bases CCTCGGCTTCTACTTCGCATTTATGAGTTCCCAGCCTAGGTCTCGCTGAATTCTCCAAGAGCCGAGTCATCCTCTTTCCT TCTGGGCGTCGCCGAGCTGC
Downstream 100 bases:
>100_bases GTGGGCTTGCGGTCCGGCGCCGCGTCCACTGGCCCCAGACGTTTCGCATCATCCGCTCCATCCATCCGCCGATCGACCTG TTCGAGGACATTGCCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MGRETQVCCSPHPCQLANTCYISANSRVSNMQLQSIVTTPATVGSAISEEEAGALARTTVNLFKAWNLTDLEACILLGGM SARTWARWKTGARWKEGGIGRIDRDLRTRMAHLMGIHKGLRYLFTEPARGYAWIRKPNATFGGQSALDLMLRGEISDLAA MREWLDAERGAW
Sequences:
>Translated_172_residues MGRETQVCCSPHPCQLANTCYISANSRVSNMQLQSIVTTPATVGSAISEEEAGALARTTVNLFKAWNLTDLEACILLGGM SARTWARWKTGARWKEGGIGRIDRDLRTRMAHLMGIHKGLRYLFTEPARGYAWIRKPNATFGGQSALDLMLRGEISDLAA MREWLDAERGAW >Mature_171_residues GRETQVCCSPHPCQLANTCYISANSRVSNMQLQSIVTTPATVGSAISEEEAGALARTTVNLFKAWNLTDLEACILLGGMS ARTWARWKTGARWKEGGIGRIDRDLRTRMAHLMGIHKGLRYLFTEPARGYAWIRKPNATFGGQSALDLMLRGEISDLAAM REWLDAERGAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19059; Mature: 18928
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRETQVCCSPHPCQLANTCYISANSRVSNMQLQSIVTTPATVGSAISEEEAGALARTTV CCCCCCEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHCHHHHCHHHHHHH NLFKAWNLTDLEACILLGGMSARTWARWKTGARWKEGGIGRIDRDLRTRMAHLMGIHKGL HHHHHCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RYLFTEPARGYAWIRKPNATFGGQSALDLMLRGEISDLAAMREWLDAERGAW HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GRETQVCCSPHPCQLANTCYISANSRVSNMQLQSIVTTPATVGSAISEEEAGALARTTV CCCCCEECCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHCHHHHCHHHHHHH NLFKAWNLTDLEACILLGGMSARTWARWKTGARWKEGGIGRIDRDLRTRMAHLMGIHKGL HHHHHCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RYLFTEPARGYAWIRKPNATFGGQSALDLMLRGEISDLAAMREWLDAERGAW HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]