| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472019
Identifier: 13472019
GI number: 13472019
Start: 1765721
End: 1766710
Strand: Reverse
Name: 13472019
Synonym: mll2179
Alternate gene names: NA
Gene position: 1766710-1765721 (Counterclockwise)
Preceding gene: 13472025
Following gene: 13472013
Centisome position: 25.11
GC content: 57.37
Gene sequence:
>990_bases ATGATCTACGGCGTCGGGTACTATGGAATGGAGGCTGTGCGCATTCTCGTAAAAAAGGGCTGGCCAATCGTTGCGGCGGT GAACCGGGCAGGTCCCAAGATCGGTGAGGATTTAGGGCGGCTCGCCGGGCTGAACGAAGACTTGGGCGTCGTCGTCCAGG ACTGCGAAACCGCCGACTACGCGACTTTGGATGCGGACATCGCGTTGGTTGTGCAAACCGAGAGGCTGAGCCTCAACTTT GCCGCTTATCAACGCCTTTTGGGAGCCGGCATCAATGTCATCTGCCACGGCTCAGAGTCCTATTTTCCGCAAGGCGCCGA TCCCTCCTTGGCCGAAAAGATTGATGCCTTGGCCAAGCGGAACGGCGTTACATTCACCGGGACTGGCATTTGGGACTTCT CCCGCATCTGGGCGGGAATGCTGATTGCGGGGCCGTGCACCGAGCTTCGCTCGCTCACGCATCGCAGCTTGACCAACGCA GAGCTGGCGAACGAACGCATGATGCGTGCCTATGGCGTAGACATGACGCAAGCCGAGTTTTTGGAAAAAGTGACCAAGGT GCCCGGCCAATTAGGAGAGCTGTATAAAGGCGTACCGGCGCACGTGATGCATGCGCTTGGCTTTACCATCAAAAACGTAA CCGAGCGGCGCGAGCCAGTACTTTCCAATCAACCGATGTGGTGTCGTATCCTCAATAGGTTTTTGGAGCCCGGCATCTCG CTCGGTCTTCGGATCATCGCGTTGGTCGAAACCGTAGAAGGGCCTACGGCAAGCGCGCACATTGAACTGCGTCTCCTTGC GGAGGGCGAGTCCGAAAACATGACGTGGGCCGTTGATGGAAGGCCATCATCCAAAATCCGGATCGACCGCGCCGATGGCG TACACACCTCAGCATCCTGCATGGTGAACCGCATTCCGGATGTAATAGCTGCTCCGCCTGGGATAAGGTTGATCTCTCAG TTTGGTCCACTGCGACCGTCGCTGACGTAA
Upstream 100 bases:
>100_bases CGTGCAAGCCTTCTCGTCCGAGTTCATCCGCCAAGGCCCTTTGATGAGCGTCGTCCACGGCACCGCCGCAAAAGCCCCGG CACGTCTCAGGCCCAAGGTC
Downstream 100 bases:
>100_bases ACGCCATCGGGACGCTCGCTCAGCCGCCCAGCAGCGCCAGTTCCTCCGGCGTCAAATGCCGCGCCGTGCCCTTGGCAAGG TCGCCCAGCGGCAGCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Oxidoreductase; Ypothetical Protein SMU.
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MIYGVGYYGMEAVRILVKKGWPIVAAVNRAGPKIGEDLGRLAGLNEDLGVVVQDCETADYATLDADIALVVQTERLSLNF AAYQRLLGAGINVICHGSESYFPQGADPSLAEKIDALAKRNGVTFTGTGIWDFSRIWAGMLIAGPCTELRSLTHRSLTNA ELANERMMRAYGVDMTQAEFLEKVTKVPGQLGELYKGVPAHVMHALGFTIKNVTERREPVLSNQPMWCRILNRFLEPGIS LGLRIIALVETVEGPTASAHIELRLLAEGESENMTWAVDGRPSSKIRIDRADGVHTSASCMVNRIPDVIAAPPGIRLISQ FGPLRPSLT
Sequences:
>Translated_329_residues MIYGVGYYGMEAVRILVKKGWPIVAAVNRAGPKIGEDLGRLAGLNEDLGVVVQDCETADYATLDADIALVVQTERLSLNF AAYQRLLGAGINVICHGSESYFPQGADPSLAEKIDALAKRNGVTFTGTGIWDFSRIWAGMLIAGPCTELRSLTHRSLTNA ELANERMMRAYGVDMTQAEFLEKVTKVPGQLGELYKGVPAHVMHALGFTIKNVTERREPVLSNQPMWCRILNRFLEPGIS LGLRIIALVETVEGPTASAHIELRLLAEGESENMTWAVDGRPSSKIRIDRADGVHTSASCMVNRIPDVIAAPPGIRLISQ FGPLRPSLT >Mature_329_residues MIYGVGYYGMEAVRILVKKGWPIVAAVNRAGPKIGEDLGRLAGLNEDLGVVVQDCETADYATLDADIALVVQTERLSLNF AAYQRLLGAGINVICHGSESYFPQGADPSLAEKIDALAKRNGVTFTGTGIWDFSRIWAGMLIAGPCTELRSLTHRSLTNA ELANERMMRAYGVDMTQAEFLEKVTKVPGQLGELYKGVPAHVMHALGFTIKNVTERREPVLSNQPMWCRILNRFLEPGIS LGLRIIALVETVEGPTASAHIELRLLAEGESENMTWAVDGRPSSKIRIDRADGVHTSASCMVNRIPDVIAAPPGIRLISQ FGPLRPSLT
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35797; Mature: 35797
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGVGYYGMEAVRILVKKGWPIVAAVNRAGPKIGEDLGRLAGLNEDLGVVVQDCETADY CEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCC ATLDADIALVVQTERLSLNFAAYQRLLGAGINVICHGSESYFPQGADPSLAEKIDALAKR EEECCCEEEEEEECHHEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHC NGVTFTGTGIWDFSRIWAGMLIAGPCTELRSLTHRSLTNAELANERMMRAYGVDMTQAEF CCCEEEECCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEKVTKVPGQLGELYKGVPAHVMHALGFTIKNVTERREPVLSNQPMWCRILNRFLEPGIS HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH LGLRIIALVETVEGPTASAHIELRLLAEGESENMTWAVDGRPSSKIRIDRADGVHTSASC HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCHHHH MVNRIPDVIAAPPGIRLISQFGPLRPSLT HHHHCCHHHCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MIYGVGYYGMEAVRILVKKGWPIVAAVNRAGPKIGEDLGRLAGLNEDLGVVVQDCETADY CEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCC ATLDADIALVVQTERLSLNFAAYQRLLGAGINVICHGSESYFPQGADPSLAEKIDALAKR EEECCCEEEEEEECHHEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHC NGVTFTGTGIWDFSRIWAGMLIAGPCTELRSLTHRSLTNAELANERMMRAYGVDMTQAEF CCCEEEECCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEKVTKVPGQLGELYKGVPAHVMHALGFTIKNVTERREPVLSNQPMWCRILNRFLEPGIS HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH LGLRIIALVETVEGPTASAHIELRLLAEGESENMTWAVDGRPSSKIRIDRADGVHTSASC HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCHHHH MVNRIPDVIAAPPGIRLISQFGPLRPSLT HHHHCCHHHCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA