| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471983
Identifier: 13471983
GI number: 13471983
Start: 1736697
End: 1738163
Strand: Reverse
Name: 13471983
Synonym: mll2134
Alternate gene names: NA
Gene position: 1738163-1736697 (Counterclockwise)
Preceding gene: 13471984
Following gene: 13471982
Centisome position: 24.7
GC content: 66.94
Gene sequence:
>1467_bases ATGGAGCCTGGACATGGCAAGCTACAGCCGCGCCGAACTGCAAGAGATCGCCCGCTGGCTGAAGGAGGGGCTTTCGGTCT CGAGGATCGCGGCGGCGTTCAGCGCGCTGCGCGGCAGCCCGGTGTCACGCAACGCCATCATCGGCATCGTCCACCGCAAC GCCATGCTGGGCGCGATCGGCTTTGCCAATGGCCGGGGGATGCCGCCGGTCGCGAGACAAGGCGCCGGCGAAAGGACAAT GCGCAAGCCGGCGGCCGCAAAGCGGGCAAATGGCAGGGCCAGCGGCGAGACGGTGGCGCAAAAGCGCGCCGGCGTCTATG CCGCCGAGGGCGGGCGCAAGAACAAGGCGCGGCCCAGGCGCGATTCCTCGCCGGCCTGGCTGCCGACGCGCCTGTTCGTG CGCGAAGTGGGCGTGCTGATCGCCGATGGCGAAGCCTATCGTCTGGAAGTGCCGGCGCCGCAGCGTGGACCGATCGGCCG CCAGCCGCATGGCGTGGCGATGCGCTTCATCGCCTGCCTGTTCGATCGCTGCCGCGCGCCGCTCGACCTGACGCTGGAAG AGGATCCGGAAAACGACCCGCCAGGCGGCCGGCCCGGCGCCGATATGCTGTGCTGCGGCATGCGAACCAAGGGGCAGAAA AGCTACTGCGGCTACCACCAGGAGCGGTTTCAGCGGCGGGTTTGCCAGTGAGCCTATTTCGGTATCTGCCGGCCCTGTTT GGGCATGCGGCTTTGCACGGTCCGCGCCTCCAGCCGCATCGGCGGGCCACCTTCGGCAACCAGGATGCCGGACACGCGGG CAAAGCCGGTGAACACCTTTATCGCGTCGGATTCGGAGATCTGCGCGGCGATCGCGGCACTGCAGGCGTTGAGCGCGCTG CGGTAGATGTGACCGCGCCGCTCGATCGGCCAGCGCTGCAGGAAATCTGCCGCGTCGCTGACGCTGTCGATCTCCTCGAC CTGCCCTTCCAAGCTGACTTTGAGCGGCACTCCGGTTTTCAGCGTACCCACGGCGTTCACCTTCGATCTCAGCGAGACTA TAAAGCCCGCGCTTATAAACGCGCAAGGCCGCCACGCGGTTGCATCGCCCCGGCGTCACGGGCCGGCGGCGGCGTCGAGC CAGTCATGCGCGCGGCTTCTCGGCTTCACCACCAATATGCCCTGTTGCCTGGCAGTCTTGCTGAAGGCCTCGAAGGCGGT GCGTGGGCAGCAACTGCCCTCGACCGACAGCCGGACCAGCCTTGCGGCTTCGAGAAAGGCGGGTGCAGTCTTGTCGGGCC ACTGGTGTCGCAATGCCGTCTCGGCGTCGGCCACCGAGCCGACCAGCATGGTCTTGTTGTCGCAAAAGCGCAGCGTAATC GGCATGAACGCCGTCATCGGCAAACCTCCCCTTGGCATCGACGCGTCATAACGTGCAGGCCGGCGGCTGGTTCCATTAGC TTGCGTGCAGACATGGGGCCGGCATGA
Upstream 100 bases:
>100_bases CGCGAGCCGGCTTTCGCACCGAACCCCTGACCGTGGCCCGGACCGGGCCTGAACCCTGACCGACGGCGCGCCCACAAGCG CGGCGAAGGCGGTCCCCTGG
Downstream 100 bases:
>100_bases GCGAGCGGCCCTTCATGCAGCTCTACGTCTCCGATTTCGTCGGCGACACGTTGCAACTCTCCACCGAGCAGATCGGCGCC TACATGCTCATCCTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MEPGHGKLQPRRTARDRPLAEGGAFGLEDRGGVQRAARQPGVTQRHHRHRPPQRHAGRDRLCQWPGDAAGRETRRRRKDN AQAGGRKAGKWQGQRRDGGAKARRRLCRRGRAQEQGAAQARFLAGLAADAPVRARSGRADRRWRSLSSGSAGAAAWTDRP PAAWRGDALHRLPVRSLPRAARPDAGRGSGKRPARRPARRRYAVLRHANQGAEKLLRLPPGAVSAAGLPVSLFRYLPALF GHAALHGPRLQPHRRATFGNQDAGHAGKAGEHLYRVGFGDLRGDRGTAGVERAAVDVTAPLDRPALQEICRVADAVDLLD LPFQADFERHSGFQRTHGVHLRSQRDYKARAYKRARPPRGCIAPASRAGGGVEPVMRAASRLHHQYALLPGSLAEGLEGG AWAATALDRQPDQPCGFEKGGCSLVGPLVSQCRLGVGHRADQHGLVVAKAQRNRHERRHRQTSPWHRRVITCRPAAGSIS LRADMGPA
Sequences:
>Translated_488_residues MEPGHGKLQPRRTARDRPLAEGGAFGLEDRGGVQRAARQPGVTQRHHRHRPPQRHAGRDRLCQWPGDAAGRETRRRRKDN AQAGGRKAGKWQGQRRDGGAKARRRLCRRGRAQEQGAAQARFLAGLAADAPVRARSGRADRRWRSLSSGSAGAAAWTDRP PAAWRGDALHRLPVRSLPRAARPDAGRGSGKRPARRPARRRYAVLRHANQGAEKLLRLPPGAVSAAGLPVSLFRYLPALF GHAALHGPRLQPHRRATFGNQDAGHAGKAGEHLYRVGFGDLRGDRGTAGVERAAVDVTAPLDRPALQEICRVADAVDLLD LPFQADFERHSGFQRTHGVHLRSQRDYKARAYKRARPPRGCIAPASRAGGGVEPVMRAASRLHHQYALLPGSLAEGLEGG AWAATALDRQPDQPCGFEKGGCSLVGPLVSQCRLGVGHRADQHGLVVAKAQRNRHERRHRQTSPWHRRVITCRPAAGSIS LRADMGPA >Mature_488_residues MEPGHGKLQPRRTARDRPLAEGGAFGLEDRGGVQRAARQPGVTQRHHRHRPPQRHAGRDRLCQWPGDAAGRETRRRRKDN AQAGGRKAGKWQGQRRDGGAKARRRLCRRGRAQEQGAAQARFLAGLAADAPVRARSGRADRRWRSLSSGSAGAAAWTDRP PAAWRGDALHRLPVRSLPRAARPDAGRGSGKRPARRPARRRYAVLRHANQGAEKLLRLPPGAVSAAGLPVSLFRYLPALF GHAALHGPRLQPHRRATFGNQDAGHAGKAGEHLYRVGFGDLRGDRGTAGVERAAVDVTAPLDRPALQEICRVADAVDLLD LPFQADFERHSGFQRTHGVHLRSQRDYKARAYKRARPPRGCIAPASRAGGGVEPVMRAASRLHHQYALLPGSLAEGLEGG AWAATALDRQPDQPCGFEKGGCSLVGPLVSQCRLGVGHRADQHGLVVAKAQRNRHERRHRQTSPWHRRVITCRPAAGSIS LRADMGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53178; Mature: 53178
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPGHGKLQPRRTARDRPLAEGGAFGLEDRGGVQRAARQPGVTQRHHRHRPPQRHAGRDR CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCHHHCCCHH LCQWPGDAAGRETRRRRKDNAQAGGRKAGKWQGQRRDGGAKARRRLCRRGRAQEQGAAQA HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH RFLAGLAADAPVRARSGRADRRWRSLSSGSAGAAAWTDRPPAAWRGDALHRLPVRSLPRA HHHHHHHCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCC ARPDAGRGSGKRPARRPARRRYAVLRHANQGAEKLLRLPPGAVSAAGLPVSLFRYLPALF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GHAALHGPRLQPHRRATFGNQDAGHAGKAGEHLYRVGFGDLRGDRGTAGVERAAVDVTAP HHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHEEEEECC LDRPALQEICRVADAVDLLDLPFQADFERHSGFQRTHGVHLRSQRDYKARAYKRARPPRG CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCHHHHHHHHCCCCCC CIAPASRAGGGVEPVMRAASRLHHQYALLPGSLAEGLEGGAWAATALDRQPDQPCGFEKG CCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCC GCSLVGPLVSQCRLGVGHRADQHGLVVAKAQRNRHERRHRQTSPWHRRVITCRPAAGSIS CCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHEEEEECCCCCCEE LRADMGPA EECCCCCC >Mature Secondary Structure MEPGHGKLQPRRTARDRPLAEGGAFGLEDRGGVQRAARQPGVTQRHHRHRPPQRHAGRDR CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCHHHCCCHH LCQWPGDAAGRETRRRRKDNAQAGGRKAGKWQGQRRDGGAKARRRLCRRGRAQEQGAAQA HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH RFLAGLAADAPVRARSGRADRRWRSLSSGSAGAAAWTDRPPAAWRGDALHRLPVRSLPRA HHHHHHHCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCC ARPDAGRGSGKRPARRPARRRYAVLRHANQGAEKLLRLPPGAVSAAGLPVSLFRYLPALF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GHAALHGPRLQPHRRATFGNQDAGHAGKAGEHLYRVGFGDLRGDRGTAGVERAAVDVTAP HHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHEEEEECC LDRPALQEICRVADAVDLLDLPFQADFERHSGFQRTHGVHLRSQRDYKARAYKRARPPRG CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCHHHHHHHHCCCCCC CIAPASRAGGGVEPVMRAASRLHHQYALLPGSLAEGLEGGAWAATALDRQPDQPCGFEKG CCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCC GCSLVGPLVSQCRLGVGHRADQHGLVVAKAQRNRHERRHRQTSPWHRRVITCRPAAGSIS CCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHEEEEECCCCCCEE LRADMGPA EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA