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The map label for this gene is ydaU [H]

Identifier: 13471982

GI number: 13471982

Start: 1736002

End: 1736700

Strand: Reverse

Name: ydaU [H]

Synonym: mll2129

Alternate gene names: 13471982

Gene position: 1736700-1736002 (Counterclockwise)

Preceding gene: 13471983

Following gene: 13471981

Centisome position: 24.68

GC content: 62.66

Gene sequence:

>699_bases
ATGAGCGAGCGGCCCTTCATGCAGCTCTACGTCTCCGATTTCGTCGGCGACACGTTGCAACTCTCCACCGAGCAGATCGG
CGCCTACATGCTCATCCTGATGGCGATGTGGAACGCCGGCGGCCGGCTGCCCGACGATGACGCCAAGCTGGCGCGGGTCG
CGCGCCTTTCCCTGAAAAGATGGCGCGCCATCAGCGCCGATCTGTTGAGCTTCTTCGAGCGCGAGGCGGGCGAGATCGGC
CACAAGAGGCTGACCAGGGAATTGCACAAGGCGCAGGTCAAAAGCGAGGCGAGGGCCGCCGCCGGCGCACGCGGCGGCGC
CGTTACCGCCCTGAAAACAAAGGCGCATGGGGCGGCAAATGCCGGCGCTTTGCCGCGGCATTCTCCAGACTCCAGAAACC
AGAGTGAAAAAGCTTCCGCTTTTTCCCCTGAAAATGCGCAGCATTTTTCGGCTCGTGAAGAGAAAGGGATGGGTGTGTCT
TCCCCTGAAAATGCGCAGCATTTGCCTCCTGCGGGCAGGAACACACCAACTCCCGGTTTTTCGGGGAAGAAGTCCGGCTG
GCAGCGGCCGAAAACCCACACCGACGCCGCCAACGCCATCATCGAGGAGATCCGCAGCCATGACCGCAGCCGAACTGCAG
CAGGCGACGAAGGCGCTGGCCGCGATGTTCTCATGCTTCCCGCAATCCGCCCTGACTGA

Upstream 100 bases:

>100_bases
ATGAACGCCGTCATCGGCAAACCTCCCCTTGGCATCGACGCGTCATAACGTGCAGGCCGGCGGCTGGTTCCATTAGCTTG
CGTGCAGACATGGGGCCGGC

Downstream 100 bases:

>100_bases
CGTCGAGATGCAGATGCGCGGCTATCTCGGCGCGGTGCGCGACGCCGAGCTTGCCGATCTGCAGGCGGCCATCCAGCGCT
TCGTGCGCGGCGAGGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSERPFMQLYVSDFVGDTLQLSTEQIGAYMLILMAMWNAGGRLPDDDAKLARVARLSLKRWRAISADLLSFFEREAGEIG
HKRLTRELHKAQVKSEARAAAGARGGAVTALKTKAHGAANAGALPRHSPDSRNQSEKASAFSPENAQHFSAREEKGMGVS
SPENAQHLPPAGRNTPTPGFSGKKSGWQRPKTHTDAANAIIEEIRSHDRSRTAAGDEGAGRDVLMLPAIRPD

Sequences:

>Translated_232_residues
MSERPFMQLYVSDFVGDTLQLSTEQIGAYMLILMAMWNAGGRLPDDDAKLARVARLSLKRWRAISADLLSFFEREAGEIG
HKRLTRELHKAQVKSEARAAAGARGGAVTALKTKAHGAANAGALPRHSPDSRNQSEKASAFSPENAQHFSAREEKGMGVS
SPENAQHLPPAGRNTPTPGFSGKKSGWQRPKTHTDAANAIIEEIRSHDRSRTAAGDEGAGRDVLMLPAIRPD
>Mature_231_residues
SERPFMQLYVSDFVGDTLQLSTEQIGAYMLILMAMWNAGGRLPDDDAKLARVARLSLKRWRAISADLLSFFEREAGEIGH
KRLTRELHKAQVKSEARAAAGARGGAVTALKTKAHGAANAGALPRHSPDSRNQSEKASAFSPENAQHFSAREEKGMGVSS
PENAQHLPPAGRNTPTPGFSGKKSGWQRPKTHTDAANAIIEEIRSHDRSRTAAGDEGAGRDVLMLPAIRPD

Specific function: Unknown

COG id: COG3756

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=102, Percent_Identity=36.2745098039216, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 25101; Mature: 24970

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERPFMQLYVSDFVGDTLQLSTEQIGAYMLILMAMWNAGGRLPDDDAKLARVARLSLKR
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WRAISADLLSFFEREAGEIGHKRLTRELHKAQVKSEARAAAGARGGAVTALKTKAHGAAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AGALPRHSPDSRNQSEKASAFSPENAQHFSAREEKGMGVSSPENAQHLPPAGRNTPTPGF
CCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SGKKSGWQRPKTHTDAANAIIEEIRSHDRSRTAAGDEGAGRDVLMLPAIRPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SERPFMQLYVSDFVGDTLQLSTEQIGAYMLILMAMWNAGGRLPDDDAKLARVARLSLKR
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WRAISADLLSFFEREAGEIGHKRLTRELHKAQVKSEARAAAGARGGAVTALKTKAHGAAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AGALPRHSPDSRNQSEKASAFSPENAQHFSAREEKGMGVSSPENAQHLPPAGRNTPTPGF
CCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SGKKSGWQRPKTHTDAANAIIEEIRSHDRSRTAAGDEGAGRDVLMLPAIRPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]