Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471935
Identifier: 13471935
GI number: 13471935
Start: 1689530
End: 1690021
Strand: Reverse
Name: 13471935
Synonym: mll2065
Alternate gene names: NA
Gene position: 1690021-1689530 (Counterclockwise)
Preceding gene: 13471936
Following gene: 13471934
Centisome position: 24.02
GC content: 67.48
Gene sequence:
>492_bases ATGTCAGTCCCCAGCCTCACTGCGAACGCGCCCCTCATCGTCATCGACCTCCAGACCGGTATGTTCGACGGCCTGCACGA GCCGCCGATCCACGACGCGCCCGCCATTGCGGAGCGTGCCCGGGCGGTGATCGACTGGGCAAGGCGCGGTGGACGCAAGG TCGCTTTCGTCAGGCATGATGGACCTGAGGGCGATCCGCTGGCGCCGGGTGAGGCAGGTTGGCCGGTATGGTCCGCCCTT GGCCAGGCTGAGGACGAGCCGACTTTCGCCAAATCCGTGCGCGACGCCTTCAGCAATCCCGCCTTTGGCGACTGGGTGGT CGGGCAAGGGGGCCGGTGGGGTTGTGATCCTCGGCGCGCAGAGCGATTTTTGCGTCGCGGCAACCGTCAAGGGCGCGATC GCCAGGGGGCTCGGCGTCACCGTGGTTTCCGATGCCCACAGCACGCTGGACAGTGCCGCCGAGAGCGCCGAGCAGATCAT CGCCCGACATAA
Upstream 100 bases:
>100_bases CCCCGCTGCTGGCTTTTGTCGGATTGGCAAGGCTGCCCTAGTTGTGGGCGGCCGTCGGCATAATCCTTGAGCCTTGATTC CTGCATGCTATGTAAAAACC
Downstream 100 bases:
>100_bases TCGCGAATTCGCCGAGGCCGGCGTCAATCTGGTGACGACAAAGGCGCTGGTTGGCGGCTGAAGCGGCAACGGGGTCGCAG TAGGCCGGACCTACCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSVPSLTANAPLIVIDLQTGMFDGLHEPPIHDAPAIAERARAVIDWARRGGRKVAFVRHDGPEGDPLAPGEAGWPVWSAL GQAEDEPTFAKSVRDAFSNPAFGDWVVGQGGRWGCDPRRAERFLRRGNRQGRDRQGARRHRGFRCPQHAGQCRRERRADH RPT
Sequences:
>Translated_163_residues MSVPSLTANAPLIVIDLQTGMFDGLHEPPIHDAPAIAERARAVIDWARRGGRKVAFVRHDGPEGDPLAPGEAGWPVWSAL GQAEDEPTFAKSVRDAFSNPAFGDWVVGQGGRWGCDPRRAERFLRRGNRQGRDRQGARRHRGFRCPQHAGQCRRERRADH RPT >Mature_162_residues SVPSLTANAPLIVIDLQTGMFDGLHEPPIHDAPAIAERARAVIDWARRGGRKVAFVRHDGPEGDPLAPGEAGWPVWSALG QAEDEPTFAKSVRDAFSNPAFGDWVVGQGGRWGCDPRRAERFLRRGNRQGRDRQGARRHRGFRCPQHAGQCRRERRADHR PT
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18144; Mature: 18012
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPSLTANAPLIVIDLQTGMFDGLHEPPIHDAPAIAERARAVIDWARRGGRKVAFVRHD CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC GPEGDPLAPGEAGWPVWSALGQAEDEPTFAKSVRDAFSNPAFGDWVVGQGGRWGCDPRRA CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHH ERFLRRGNRQGRDRQGARRHRGFRCPQHAGQCRRERRADHRPT HHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVPSLTANAPLIVIDLQTGMFDGLHEPPIHDAPAIAERARAVIDWARRGGRKVAFVRHD CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC GPEGDPLAPGEAGWPVWSALGQAEDEPTFAKSVRDAFSNPAFGDWVVGQGGRWGCDPRRA CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHH ERFLRRGNRQGRDRQGARRHRGFRCPQHAGQCRRERRADHRPT HHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA