Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471894
Identifier: 13471894
GI number: 13471894
Start: 1652958
End: 1653254
Strand: Reverse
Name: 13471894
Synonym: msl2014
Alternate gene names: NA
Gene position: 1653254-1652958 (Counterclockwise)
Preceding gene: 13471895
Following gene: 13471891
Centisome position: 23.5
GC content: 61.95
Gene sequence:
>297_bases ATGAGGGTCGCCAGAATGAAGATCGAAGACGCAGTGACCGCTGTAACAGCCGAGGCCAACGCGCTCATGTCTTGCCTCGG CCAGCCCGTCGTCGCCTACCACGTCACGGAAATCATGCGAGAGGCCAATTTGGAACACGCCAGGCAGATGCAGCTCGCCT TGATGCGGCGAAGCATCGAGGCGCTGGTCGATGACGGCCTGGAGGATGTGGCCGCGGAGCAGTGTGTTTCACAATTCCAC GGTCGTCTCGGCTTGGCCTGGAGGCTGCTGCACGCATCGGATGGCGTGGCGCACTGA
Upstream 100 bases:
>100_bases ATAAGCTTGGCGCGCCACTTTCGGTCGCGCGCGGCAGGCTGAAATCAAAAGAAGCGACGGACCACCGTCGCCTTGCGGGG AGGCGTCAGCATCATTCTTG
Downstream 100 bases:
>100_bases TTTCCCAGGAAATCGCTGGATCGTATTGGTCCCGGCCGCCTTTGAAACCCTGTCAGCGATATCGTCGGCGATAATAGGAT CGTCGGAAAAATGATGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MRVARMKIEDAVTAVTAEANALMSCLGQPVVAYHVTEIMREANLEHARQMQLALMRRSIEALVDDGLEDVAAEQCVSQFH GRLGLAWRLLHASDGVAH
Sequences:
>Translated_98_residues MRVARMKIEDAVTAVTAEANALMSCLGQPVVAYHVTEIMREANLEHARQMQLALMRRSIEALVDDGLEDVAAEQCVSQFH GRLGLAWRLLHASDGVAH >Mature_98_residues MRVARMKIEDAVTAVTAEANALMSCLGQPVVAYHVTEIMREANLEHARQMQLALMRRSIEALVDDGLEDVAAEQCVSQFH GRLGLAWRLLHASDGVAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10796; Mature: 10796
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVARMKIEDAVTAVTAEANALMSCLGQPVVAYHVTEIMREANLEHARQMQLALMRRSIE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ALVDDGLEDVAAEQCVSQFHGRLGLAWRLLHASDGVAH HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRVARMKIEDAVTAVTAEANALMSCLGQPVVAYHVTEIMREANLEHARQMQLALMRRSIE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ALVDDGLEDVAAEQCVSQFHGRLGLAWRLLHASDGVAH HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA