Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471877
Identifier: 13471877
GI number: 13471877
Start: 1635494
End: 1635916
Strand: Reverse
Name: 13471877
Synonym: mll1991
Alternate gene names: NA
Gene position: 1635916-1635494 (Counterclockwise)
Preceding gene: 13471879
Following gene: 13471876
Centisome position: 23.25
GC content: 61.94
Gene sequence:
>423_bases GTGTCCGAAATTATGAACCTGCATCAGACGCCTGAAACTGTGACCTTGCATCGCGCCCGGTGGGCCGGTCGGATAGTGAG CGCGTTTGTCGTTGTCGCTCTGGCGGCAGACGGCACTATTCAGCTTTTCGCGCCGGCACAGATCGCGAGCATGTCGCAGG AAACCGGGTTCGCGATGGACCTGACCCGTATCGTGGGTCCGATCATACTCGCCTGCGCCATCCTTTACGCCATCCCGGCC ACCGCCGTCCTCGGCGCCATCCTGGTGACGGGCTTTTTGGGAAGTGCCATCTGCGCCCATGTCCGCATTGGTGAGTTGGG GTCGCCGCCGGAAATCGTTTCCCTGCTTCTGGGCGCGATGACATGGGGCGGCCTCTATCTGCGCGATCCCCGTCTCCGGG CCATTCTACCGCTCATCCATTGA
Upstream 100 bases:
>100_bases TTCCCGAAAAGAGAACAGTTGGTTCGTTTCCTTGGTGTTTATCACACCTAAGAGGCACAGTAAGCTTCGAATATGGGATC GCCCCATCGGAGAATGACAA
Downstream 100 bases:
>100_bases ACCAACCGGGGCAGTGCTCTGTCCCTCAACAGGAGAAAACACATGTTTTTAGTCATGGGAATCACGGGAAAAGTTGGCGG CGCAACGGCAGAACATCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSEIMNLHQTPETVTLHRARWAGRIVSAFVVVALAADGTIQLFAPAQIASMSQETGFAMDLTRIVGPIILACAILYAIPA TAVLGAILVTGFLGSAICAHVRIGELGSPPEIVSLLLGAMTWGGLYLRDPRLRAILPLIH
Sequences:
>Translated_140_residues MSEIMNLHQTPETVTLHRARWAGRIVSAFVVVALAADGTIQLFAPAQIASMSQETGFAMDLTRIVGPIILACAILYAIPA TAVLGAILVTGFLGSAICAHVRIGELGSPPEIVSLLLGAMTWGGLYLRDPRLRAILPLIH >Mature_139_residues SEIMNLHQTPETVTLHRARWAGRIVSAFVVVALAADGTIQLFAPAQIASMSQETGFAMDLTRIVGPIILACAILYAIPAT AVLGAILVTGFLGSAICAHVRIGELGSPPEIVSLLLGAMTWGGLYLRDPRLRAILPLIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14825; Mature: 14694
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIMNLHQTPETVTLHRARWAGRIVSAFVVVALAADGTIQLFAPAQIASMSQETGFAMD CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHH LTRIVGPIILACAILYAIPATAVLGAILVTGFLGSAICAHVRIGELGSPPEIVSLLLGAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TWGGLYLRDPRLRAILPLIH HHCCEEEECCHHHHHCCCCC >Mature Secondary Structure SEIMNLHQTPETVTLHRARWAGRIVSAFVVVALAADGTIQLFAPAQIASMSQETGFAMD CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHH LTRIVGPIILACAILYAIPATAVLGAILVTGFLGSAICAHVRIGELGSPPEIVSLLLGAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TWGGLYLRDPRLRAILPLIH HHCCEEEECCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA