| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471753
Identifier: 13471753
GI number: 13471753
Start: 1508902
End: 1509435
Strand: Reverse
Name: 13471753
Synonym: mll1824
Alternate gene names: NA
Gene position: 1509435-1508902 (Counterclockwise)
Preceding gene: 13471757
Following gene: 13471751
Centisome position: 21.45
GC content: 66.85
Gene sequence:
>534_bases ATGACGCATTTCATCATCCTGCCGGGCAGCGGCGGTTCCGGCCCGGCGCATTGGCAATCGCGCTGGGAAGACGCCAATCC GGCAATGCGGCGCTTCCAGCCCTCAAGCTGGGACCTGCCGGATTTCGCCGACTGGCTGGCGGCGCTGGAGGCTGCGGTGA TCGCGGCGCCCGAGCCGCCGGTGCTGGTCGCGCACAGCCTGTCCTGCCTGCTGATCGCGCATTGGCAGAAGATTTCGCAA AGGCCCGTCAAGGCGGCCTTGCTGGTCGGCGTTCCCGATCCGGCGTCGGCGGTCTTTCCCAGATATGGCATGACCTTCGC CGGGATTCCGCAGGGCAAGCTGCGCTTTGCCTCGCTTGTGGTGATCAGTACCGACGATCCCTATGGCTCGGCGGAGTATG CCGAGGCGCGGGCGACGCAATGGGGCAGCCGCCTGGCCGTCATCGGGCCGTTCGGCCATATCAATGCAGAAAGCGGCCTG GGCGACTGGCCGGAAGGTTTGGCGCTGCTCGAGGGGCTGGTGTCCGAGGCTTGA
Upstream 100 bases:
>100_bases TGAATCCATCGGTAAGGACGTGATTTCTCCGATGATTTCCCATTCCCGACGGCAATTCAAGACGCCACCATGCACCTGTG ATCGATAGGAGCAAGGCGAC
Downstream 100 bases:
>100_bases AGGCGCTCAGCCGCCATTCACCAAAGCGAGGACAAGCTTCTGCAGATTGCCGCCCTTGCCGAACTCGACGCGGTCGAAAT CCCGGCTTGCCTGTATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTHFIILPGSGGSGPAHWQSRWEDANPAMRRFQPSSWDLPDFADWLAALEAAVIAAPEPPVLVAHSLSCLLIAHWQKISQ RPVKAALLVGVPDPASAVFPRYGMTFAGIPQGKLRFASLVVISTDDPYGSAEYAEARATQWGSRLAVIGPFGHINAESGL GDWPEGLALLEGLVSEA
Sequences:
>Translated_177_residues MTHFIILPGSGGSGPAHWQSRWEDANPAMRRFQPSSWDLPDFADWLAALEAAVIAAPEPPVLVAHSLSCLLIAHWQKISQ RPVKAALLVGVPDPASAVFPRYGMTFAGIPQGKLRFASLVVISTDDPYGSAEYAEARATQWGSRLAVIGPFGHINAESGL GDWPEGLALLEGLVSEA >Mature_176_residues THFIILPGSGGSGPAHWQSRWEDANPAMRRFQPSSWDLPDFADWLAALEAAVIAAPEPPVLVAHSLSCLLIAHWQKISQR PVKAALLVGVPDPASAVFPRYGMTFAGIPQGKLRFASLVVISTDDPYGSAEYAEARATQWGSRLAVIGPFGHINAESGLG DWPEGLALLEGLVSEA
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18909; Mature: 18777
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHFIILPGSGGSGPAHWQSRWEDANPAMRRFQPSSWDLPDFADWLAALEAAVIAAPEPP CCEEEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCC VLVAHSLSCLLIAHWQKISQRPVKAALLVGVPDPASAVFPRYGMTFAGIPQGKLRFASLV EEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCEECCCCCCCEEEEEEE VISTDDPYGSAEYAEARATQWGSRLAVIGPFGHINAESGLGDWPEGLALLEGLVSEA EEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure THFIILPGSGGSGPAHWQSRWEDANPAMRRFQPSSWDLPDFADWLAALEAAVIAAPEPP CEEEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCC VLVAHSLSCLLIAHWQKISQRPVKAALLVGVPDPASAVFPRYGMTFAGIPQGKLRFASLV EEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCEECCCCCCCEEEEEEE VISTDDPYGSAEYAEARATQWGSRLAVIGPFGHINAESGLGDWPEGLALLEGLVSEA EEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA