| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471507
Identifier: 13471507
GI number: 13471507
Start: 1244871
End: 1245917
Strand: Direct
Name: 13471507
Synonym: mlr1501
Alternate gene names: NA
Gene position: 1244871-1245917 (Clockwise)
Preceding gene: 13471505
Following gene: 13471508
Centisome position: 17.69
GC content: 62.56
Gene sequence:
>1047_bases GTGATGGTGACAGCCAAGATGATACTCCTTCGACTGTTGCGCGCTCGCGCGGCCATGGGCAACCCGGCGCATCGCTCCTG CCCTGCGCACAGCTTTCTCCCGCCTGCCCCGCCTGTCAAGCTGCCCACACGCCAAGGTGGCAATCCATCTTGCTTGCGTC AGGGTTTTCCCGCAGTCTCCATGGATCATCTTTCCCGTGGAGCAAGCAAAATGCCGTCATTCCTTCCGCCGCTGACGCGC ATGGCGCTTGTGCTCTACTGCCTCGTCCCGCTCATTGCTGGCACGGTGGCCGCGCCGGCGCAGACAATCGGCGAGATCAA TAACGCGAACGGCTTTCACGAGATGCTGATGGGCATTGGCCCGGGTTTCACCGCGGCCGTCAAATCGGCGCCGGGAACGC CGCCGCAAAAGGTCCAGGATGCCCTTGCCGCCGCCATGGAAGGTGCCTTTGATCCGGAGAAGATGGAGGCGGCCATCGAA GCCCGGATGGCGGACAAGCTCAGCGCCAGGGACCTGTCCGAGCTGGCTTCGTTTTATGCTTCACCCCTGGGCAGACGGGT CACCGCTCTGGAGATCCAGGCTTCGTCACCGCAAGCAAGGGAGGCCAAGAAGATCGGGGGCGCCAAAATCCTCGACGAGC TTCCATCCAGGGATCCGGCCAGGCTCGCATTGTACAGGAAGATGATGGACGATATCAGCGCCGTCGACACCGGAGAAGCC GTCGGCTTGAACATGGGCTATGCGATGCTTTCCGAAATGCTGGGCGCGGCCGGAAAGCCCCTGCCCGACGACCAGGTAAT GGCCCTGCTGCGCAAGCAAACCGAAGGGCTTCGCCGTGACATCGCCAACGATGCCATGGAATCTGCAGCCTATATCTACC GGGATATGTCCATGGCCGACCTGAAGCTCTATGAGGCCTTCCTGGCCTCACCCGCCGGCAGCCGCTATTACGACCAGATG CAGGTCGCCCTGGGCGCGGTGATGACGGACGAGGCGCGCTCGTTCGGCCATCGATTTTTCGTCGCCCTCGGCTACCGCAA GGCCTGA
Upstream 100 bases:
>100_bases GGCGAGGCCGACGACGATGTAGTACCAACTGCCCCCCAGCGAAGCCAGCCAGATGCCACCGCCACCAAGCGCCAGACCGA GGAGAAAGAGAACGAAGGAG
Downstream 100 bases:
>100_bases ACGACGGTATCCCGGGCGAGCGAGAGCTAAATGGCTGGCGAAAATCGATACTCGCCCATCCTAGTGGGCATCTTCCTGTC ACAGATGCTCATCGGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MMVTAKMILLRLLRARAAMGNPAHRSCPAHSFLPPAPPVKLPTRQGGNPSCLRQGFPAVSMDHLSRGASKMPSFLPPLTR MALVLYCLVPLIAGTVAAPAQTIGEINNANGFHEMLMGIGPGFTAAVKSAPGTPPQKVQDALAAAMEGAFDPEKMEAAIE ARMADKLSARDLSELASFYASPLGRRVTALEIQASSPQAREAKKIGGAKILDELPSRDPARLALYRKMMDDISAVDTGEA VGLNMGYAMLSEMLGAAGKPLPDDQVMALLRKQTEGLRRDIANDAMESAAYIYRDMSMADLKLYEAFLASPAGSRYYDQM QVALGAVMTDEARSFGHRFFVALGYRKA
Sequences:
>Translated_348_residues MMVTAKMILLRLLRARAAMGNPAHRSCPAHSFLPPAPPVKLPTRQGGNPSCLRQGFPAVSMDHLSRGASKMPSFLPPLTR MALVLYCLVPLIAGTVAAPAQTIGEINNANGFHEMLMGIGPGFTAAVKSAPGTPPQKVQDALAAAMEGAFDPEKMEAAIE ARMADKLSARDLSELASFYASPLGRRVTALEIQASSPQAREAKKIGGAKILDELPSRDPARLALYRKMMDDISAVDTGEA VGLNMGYAMLSEMLGAAGKPLPDDQVMALLRKQTEGLRRDIANDAMESAAYIYRDMSMADLKLYEAFLASPAGSRYYDQM QVALGAVMTDEARSFGHRFFVALGYRKA >Mature_348_residues MMVTAKMILLRLLRARAAMGNPAHRSCPAHSFLPPAPPVKLPTRQGGNPSCLRQGFPAVSMDHLSRGASKMPSFLPPLTR MALVLYCLVPLIAGTVAAPAQTIGEINNANGFHEMLMGIGPGFTAAVKSAPGTPPQKVQDALAAAMEGAFDPEKMEAAIE ARMADKLSARDLSELASFYASPLGRRVTALEIQASSPQAREAKKIGGAKILDELPSRDPARLALYRKMMDDISAVDTGEA VGLNMGYAMLSEMLGAAGKPLPDDQVMALLRKQTEGLRRDIANDAMESAAYIYRDMSMADLKLYEAFLASPAGSRYYDQM QVALGAVMTDEARSFGHRFFVALGYRKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37347; Mature: 37347
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVTAKMILLRLLRARAAMGNPAHRSCPAHSFLPPAPPVKLPTRQGGNPSCLRQGFPAVS CCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC MDHLSRGASKMPSFLPPLTRMALVLYCLVPLIAGTVAAPAQTIGEINNANGFHEMLMGIG HHHHHCCHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC PGFTAAVKSAPGTPPQKVQDALAAAMEGAFDPEKMEAAIEARMADKLSARDLSELASFYA CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPLGRRVTALEIQASSPQAREAKKIGGAKILDELPSRDPARLALYRKMMDDISAVDTGEA HHHCCCEEEEEEECCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH VGLNMGYAMLSEMLGAAGKPLPDDQVMALLRKQTEGLRRDIANDAMESAAYIYRDMSMAD HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LKLYEAFLASPAGSRYYDQMQVALGAVMTDEARSFGHRFFVALGYRKA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMVTAKMILLRLLRARAAMGNPAHRSCPAHSFLPPAPPVKLPTRQGGNPSCLRQGFPAVS CCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC MDHLSRGASKMPSFLPPLTRMALVLYCLVPLIAGTVAAPAQTIGEINNANGFHEMLMGIG HHHHHCCHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC PGFTAAVKSAPGTPPQKVQDALAAAMEGAFDPEKMEAAIEARMADKLSARDLSELASFYA CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPLGRRVTALEIQASSPQAREAKKIGGAKILDELPSRDPARLALYRKMMDDISAVDTGEA HHHCCCEEEEEEECCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH VGLNMGYAMLSEMLGAAGKPLPDDQVMALLRKQTEGLRRDIANDAMESAAYIYRDMSMAD HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LKLYEAFLASPAGSRYYDQMQVALGAVMTDEARSFGHRFFVALGYRKA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA