| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is sgaA [H]
Identifier: 13471371
GI number: 13471371
Start: 1108542
End: 1109732
Strand: Direct
Name: sgaA [H]
Synonym: mlr1322
Alternate gene names: 13471371
Gene position: 1108542-1109732 (Clockwise)
Preceding gene: 13471370
Following gene: 13471372
Centisome position: 15.76
GC content: 67.09
Gene sequence:
>1191_bases ATGGCCGGTTTCACCCATCTTTTCATTCCCGGGCCGACCAACATCCCCGAACAGGTCCGGCAGGCGATGAACCTGCCGAT GGAGGACATGCGCGCCGCGTCCTTCCCCGATCTCACTTTGCCGCTGTTCGAGGACATCAAACGCGTCTTCAAGAACGAGA CCGGCCGCGTCTTCATCTACCCCTCCTCCGGCACCGGCGCCTGGGAAGCGGCGATGACCAATGTGCTTAGCCCCGGCGAC CGCGTGCTGATGTCGCGCTTCGGCCAGTTCTCGCATCTGTGGGTCGACATGGCCGAGCGCCTCGGCCTCGAGGTCGATGT CATCGACTGCGAATGGGGCACCGGCGTGCCGCTCGAGCTCTATGCCGAGCGGCTGAAGGCGGACAAGGAGCATCGCATCA AGGCCGTCTTCTGCACGCAGAACGAGACGGCGACCGGCGTGACCAGCGATGTCGCCGGCTGCCGCGCCGCGCTCGACGAT GCCAACCACCCTGCCCTGCTCTTCGTCGACGGCGTGTCGTCGATCGGCTCGATCGACTTCCGCCAGGAGGAATGGGGCGT GGACTGCGCCGTCAGCGGCTCGCAGAAAGGTTTCATGCTGCCCGCCGGCCTCGGTTTCCTCTCCGTGAGCAAGAAGGCGC TCGTCGCTTCGCGGACCGCCACCCACCGGCGCTGCTTCTTCTCCTTCGAGGACATGATCCGCGCCAACGATGCCGGCTAT TTCCCCTACACGCCGGCGACGCAGCTGCTGCGCGGCCTGCGCGCCTCGCTCGACCTGATCGCCGAGGAAGGGCTGGACAA CATCTTCGCCCGCCATCATCGCCTCGCCGAAGGCGTGCGCAAGGCGGTCGACGCCTGGGGCCTGAAACTCTGCGCCAAGG CGCCGAAATGGCACTCCGATACGGTCAGCGCCATTCAGGTGCCGGAAGGCATCGACAGCGGCGACATCGTCAAGCGCGCC TACCGCACCTACCAGACGTCGCTCGGCGGCGGCCTCAACAAGGTGATGGGCAAGGTCTTCCGCATCGGCCATCTCGGCTG GCTGAACGAGGTGATGGTGCTCGCCTCGCTGTCGGCGGCCGAAATGGCGTTGCTCGACTGCGGCGTGCGGCTGGCGCCGG GCTCCGGCGTCGGCGCCGCCATCCAGCATTTCCGCGCCTCGGCCGCCGTGCCGGTCGCCGAAGCCGCCTGA
Upstream 100 bases:
>100_bases CCCGCGCGCGGCGAGATCTTACCCGCCAAGGTGTTGTTGGCTTTAGCCGTCGAAACGAAACTCCCCCCACCGCTTTGCTG GATCAGGAGGAGTTCGCATC
Downstream 100 bases:
>100_bases GGGAGCCGACGATGAGCCACACCATCAACCATTTGAAAAAATTGCGGCTGCAGCGCAGCGAGCTGGCGGTTCCCGGTTCC AGCCCGGAGATGATCGACAA
Product: serine-glyoxylate aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAGFTHLFIPGPTNIPEQVRQAMNLPMEDMRAASFPDLTLPLFEDIKRVFKNETGRVFIYPSSGTGAWEAAMTNVLSPGD RVLMSRFGQFSHLWVDMAERLGLEVDVIDCEWGTGVPLELYAERLKADKEHRIKAVFCTQNETATGVTSDVAGCRAALDD ANHPALLFVDGVSSIGSIDFRQEEWGVDCAVSGSQKGFMLPAGLGFLSVSKKALVASRTATHRRCFFSFEDMIRANDAGY FPYTPATQLLRGLRASLDLIAEEGLDNIFARHHRLAEGVRKAVDAWGLKLCAKAPKWHSDTVSAIQVPEGIDSGDIVKRA YRTYQTSLGGGLNKVMGKVFRIGHLGWLNEVMVLASLSAAEMALLDCGVRLAPGSGVGAAIQHFRASAAVPVAEAA
Sequences:
>Translated_396_residues MAGFTHLFIPGPTNIPEQVRQAMNLPMEDMRAASFPDLTLPLFEDIKRVFKNETGRVFIYPSSGTGAWEAAMTNVLSPGD RVLMSRFGQFSHLWVDMAERLGLEVDVIDCEWGTGVPLELYAERLKADKEHRIKAVFCTQNETATGVTSDVAGCRAALDD ANHPALLFVDGVSSIGSIDFRQEEWGVDCAVSGSQKGFMLPAGLGFLSVSKKALVASRTATHRRCFFSFEDMIRANDAGY FPYTPATQLLRGLRASLDLIAEEGLDNIFARHHRLAEGVRKAVDAWGLKLCAKAPKWHSDTVSAIQVPEGIDSGDIVKRA YRTYQTSLGGGLNKVMGKVFRIGHLGWLNEVMVLASLSAAEMALLDCGVRLAPGSGVGAAIQHFRASAAVPVAEAA >Mature_395_residues AGFTHLFIPGPTNIPEQVRQAMNLPMEDMRAASFPDLTLPLFEDIKRVFKNETGRVFIYPSSGTGAWEAAMTNVLSPGDR VLMSRFGQFSHLWVDMAERLGLEVDVIDCEWGTGVPLELYAERLKADKEHRIKAVFCTQNETATGVTSDVAGCRAALDDA NHPALLFVDGVSSIGSIDFRQEEWGVDCAVSGSQKGFMLPAGLGFLSVSKKALVASRTATHRRCFFSFEDMIRANDAGYF PYTPATQLLRGLRASLDLIAEEGLDNIFARHHRLAEGVRKAVDAWGLKLCAKAPKWHSDTVSAIQVPEGIDSGDIVKRAY RTYQTSLGGGLNKVMGKVFRIGHLGWLNEVMVLASLSAAEMALLDCGVRLAPGSGVGAAIQHFRASAAVPVAEAA
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=348, Percent_Identity=32.4712643678161, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17536281, Length=351, Percent_Identity=29.3447293447293, Blast_Score=151, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6321079, Length=360, Percent_Identity=29.4444444444444, Blast_Score=126, Evalue=6e-30, Organism=Drosophila melanogaster, GI17530823, Length=369, Percent_Identity=30.0813008130081, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42947; Mature: 42815
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFTHLFIPGPTNIPEQVRQAMNLPMEDMRAASFPDLTLPLFEDIKRVFKNETGRVFIY CCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEE PSSGTGAWEAAMTNVLSPGDRVLMSRFGQFSHLWVDMAERLGLEVDVIDCEWGTGVPLEL ECCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHH YAERLKADKEHRIKAVFCTQNETATGVTSDVAGCRAALDDANHPALLFVDGVSSIGSIDF HHHHHCCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC RQEEWGVDCAVSGSQKGFMLPAGLGFLSVSKKALVASRTATHRRCFFSFEDMIRANDAGY CHHHHCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FPYTPATQLLRGLRASLDLIAEEGLDNIFARHHRLAEGVRKAVDAWGLKLCAKAPKWHSD CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TVSAIQVPEGIDSGDIVKRAYRTYQTSLGGGLNKVMGKVFRIGHLGWLNEVMVLASLSAA CHHEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EMALLDCGVRLAPGSGVGAAIQHFRASAAVPVAEAA HHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AGFTHLFIPGPTNIPEQVRQAMNLPMEDMRAASFPDLTLPLFEDIKRVFKNETGRVFIY CCCEEEEECCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEE PSSGTGAWEAAMTNVLSPGDRVLMSRFGQFSHLWVDMAERLGLEVDVIDCEWGTGVPLEL ECCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHH YAERLKADKEHRIKAVFCTQNETATGVTSDVAGCRAALDDANHPALLFVDGVSSIGSIDF HHHHHCCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC RQEEWGVDCAVSGSQKGFMLPAGLGFLSVSKKALVASRTATHRRCFFSFEDMIRANDAGY CHHHHCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FPYTPATQLLRGLRASLDLIAEEGLDNIFARHHRLAEGVRKAVDAWGLKLCAKAPKWHSD CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TVSAIQVPEGIDSGDIVKRAYRTYQTSLGGGLNKVMGKVFRIGHLGWLNEVMVLASLSAA CHHEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EMALLDCGVRLAPGSGVGAAIQHFRASAAVPVAEAA HHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8898880 [H]