Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471108
Identifier: 13471108
GI number: 13471108
Start: 818858
End: 819664
Strand: Direct
Name: 13471108
Synonym: mlr0992
Alternate gene names: NA
Gene position: 818858-819664 (Clockwise)
Preceding gene: 13471104
Following gene: 13471109
Centisome position: 11.64
GC content: 61.71
Gene sequence:
>807_bases ATGTCCAAGACCATCATGCTGATCCACGGCGCCTGGCTGAACGCCCACTGCTGGGAAGGCTTCAAGGCTCGTTACGAAGC CAGAGACTACAACGTCATCGCCCCGGCCTGGCCATTTGACGACCGATCTCCAAGCGAGCTGCGTGCCTCCCCGAATCCCG CCCTCGCCCAGGTCGGTATCAACGAGCTCATCAATCACTACGATCGGCTCATCCGCGCGTTGCCCGAGCCACCAATCCTG ATCGGCCACTCGTTTGGCGGTACCGTGATGCAGCATCTGCTTGACCGCGGGCTCGGCGTGGCCGGCGTAGCCATCGACCC CGCGCCGACTTCCGGCGTACTGGTCGGGTGGCAGACCATCAAGTCGACCTTCCCCGTGTTCTTTTCCTGGCGGAGCTGGC GCCGCGTCATGACCATGTCGCGGAAGTTTTTCAGCACGCGCTTCGCACAGACCTTACCGGCAGCGCAGGTCAACACGATG TACGACCGCTACATCGTCCCCACGCCAGGGAAGATCTACTGGGACGGCCTGGTTTCGGCCGCAGGGAAGATCCGTTGGGA CAACCCCAATCGCGCACCTCTTCTGCTCATCGGCGGTGGCATCGACATGATTGCCCAGGCCAAGATGACAAAAGCCATTT TCGAGAAGCAGAAGCAGGCGCCGTCGAAGACCGAACTCAAGATATATCCCAACCGCTCGCACTGGACCTGTCTTCAGCCG GGCTGGGAGGAAGTCGCGGACTTCGCACTCGACTGGGCCGCTAGAAACGCCCGCGCCCTCAAGAACGTACCGGTGTACGC AGCCTAG
Upstream 100 bases:
>100_bases CTGCGCGTGCGCCCACAACATAGCGTTCTCATGGCTCTTATCGGCGCTGGCCGATCGAGCAAATTCGAAGCGCGGGCCTA TCAGACCGACGGAGAGACTA
Downstream 100 bases:
>100_bases CCGCTCGGACCATCAGCAGGTCATGATCGCCGATGGACTCTCCCAAGGTTCATCAATCCAGGATTTTCGTAGAACGCCAC GCGTAGTGAATCCGGTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSKTIMLIHGAWLNAHCWEGFKARYEARDYNVIAPAWPFDDRSPSELRASPNPALAQVGINELINHYDRLIRALPEPPIL IGHSFGGTVMQHLLDRGLGVAGVAIDPAPTSGVLVGWQTIKSTFPVFFSWRSWRRVMTMSRKFFSTRFAQTLPAAQVNTM YDRYIVPTPGKIYWDGLVSAAGKIRWDNPNRAPLLLIGGGIDMIAQAKMTKAIFEKQKQAPSKTELKIYPNRSHWTCLQP GWEEVADFALDWAARNARALKNVPVYAA
Sequences:
>Translated_268_residues MSKTIMLIHGAWLNAHCWEGFKARYEARDYNVIAPAWPFDDRSPSELRASPNPALAQVGINELINHYDRLIRALPEPPIL IGHSFGGTVMQHLLDRGLGVAGVAIDPAPTSGVLVGWQTIKSTFPVFFSWRSWRRVMTMSRKFFSTRFAQTLPAAQVNTM YDRYIVPTPGKIYWDGLVSAAGKIRWDNPNRAPLLLIGGGIDMIAQAKMTKAIFEKQKQAPSKTELKIYPNRSHWTCLQP GWEEVADFALDWAARNARALKNVPVYAA >Mature_267_residues SKTIMLIHGAWLNAHCWEGFKARYEARDYNVIAPAWPFDDRSPSELRASPNPALAQVGINELINHYDRLIRALPEPPILI GHSFGGTVMQHLLDRGLGVAGVAIDPAPTSGVLVGWQTIKSTFPVFFSWRSWRRVMTMSRKFFSTRFAQTLPAAQVNTMY DRYIVPTPGKIYWDGLVSAAGKIRWDNPNRAPLLLIGGGIDMIAQAKMTKAIFEKQKQAPSKTELKIYPNRSHWTCLQPG WEEVADFALDWAARNARALKNVPVYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30105; Mature: 29974
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTIMLIHGAWLNAHCWEGFKARYEARDYNVIAPAWPFDDRSPSELRASPNPALAQVGI CCCEEEEEECCCCCCHHHCCHHHHCCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHH NELINHYDRLIRALPEPPILIGHSFGGTVMQHLLDRGLGVAGVAIDPAPTSGVLVGWQTI HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHH KSTFPVFFSWRSWRRVMTMSRKFFSTRFAQTLPAAQVNTMYDRYIVPTPGKIYWDGLVSA HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEECCCCCCEEHHHHHHC AGKIRWDNPNRAPLLLIGGGIDMIAQAKMTKAIFEKQKQAPSKTELKIYPNRSHWTCLQP CCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECC GWEEVADFALDWAARNARALKNVPVYAA CHHHHHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure SKTIMLIHGAWLNAHCWEGFKARYEARDYNVIAPAWPFDDRSPSELRASPNPALAQVGI CCEEEEEECCCCCCHHHCCHHHHCCCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHH NELINHYDRLIRALPEPPILIGHSFGGTVMQHLLDRGLGVAGVAIDPAPTSGVLVGWQTI HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHH KSTFPVFFSWRSWRRVMTMSRKFFSTRFAQTLPAAQVNTMYDRYIVPTPGKIYWDGLVSA HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEECCCCCCEEHHHHHHC AGKIRWDNPNRAPLLLIGGGIDMIAQAKMTKAIFEKQKQAPSKTELKIYPNRSHWTCLQP CCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECC GWEEVADFALDWAARNARALKNVPVYAA CHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA