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The map label for this gene is nodV [H]

Identifier: 13471105

GI number: 13471105

Start: 814360

End: 816207

Strand: Reverse

Name: nodV [H]

Synonym: mll0989

Alternate gene names: 13471105

Gene position: 816207-814360 (Counterclockwise)

Preceding gene: 13471106

Following gene: 13471100

Centisome position: 11.6

GC content: 61.58

Gene sequence:

>1848_bases
ATGGAGCTAAGGTCAATTAGGCAGCGCCGCGTCGTCGCCGGGGCGATCGGCACTGGGAGCGTTTTGCTCGCGCTGTTTAC
CGGCGAGCCATCTGGGCTGCTGGTTGCAATTGCGGCTGTGTGCATTTGCCTCGGCTGGAAAGCTGGACTGGCAGCGACTG
CCGCAGGCGGCCTGATTTGCGCATTGATCCTGATGGCGCCGGGCTACGCGGTCGAACCCGGCCTCGTCAGGTTTGTGGCA
TTTGTTGCGGCGACGTTTGGGCTGTGGCTCGTGATCAAGATTTTCAGAACCATCAGTTTTTATGACCGCGTCTATCAGGG
CGCCGGGCCCAACGTCACGGATATTCCAGGTCTCGGATGGTCGGCATATCCTGATGGCCGCCTTCGATTCGTCAACAGCG
CTGTCCTCGACTACCTCGGAGTCACGGTCGAGGAGATGCGTGAGATCATGGATGCCGACGACTTTTCCTGGTGGCTGAGA
TTTGTTCATCCAGACGATGTTGATACGAGCATGGCGCAATGGCGCCACAGCGTGGAGACGGGCGAGCCGATGCTCGCGGA
GCAGCGTTTACGCCGGTTCGATGGCAGCTATCGATGGTTTCGCGACTCGGGTGTCGCCTCGCGCGATGAGCGCGGGCGAA
TTGTCGGCTGGTATGGTCATACCGAAGACATCGACGACCGGCGAAAAGCGGAAGCCGCGCTCCGGCAGAGCGAGCGGGAG
CTCAGGCTACTGGTCGATACGGTTCCCACTATGATCTGGCTAATGACGCCGGCGGGATTGCCCTACTATTTCAACAAGCG
GTTCGTCGACTGGGCAGGTATCGAGTCAGCCAAGGAACCGCGAGGCACGCGGCAATTCGCATCGCATGTGGAACTGTTCC
ACCCTGATGATCGCGCGGCCGTCAAGGCCGTGTTCCAGAAGTCGTTTGCCCGTGGAGAGGCGCTCCAGCACAAGGCTCGG
CTGTGCCGGAAGGACGGCGAATATCGCTGGATCGATTCGCGGTTCGAACCGCTGCGCGACGAAGATGGCACTATCGTTCG
CTGGTACGGCGTCAACTTCGACATTGACGACCAGGTTCGCGCCCAGGAGGCGCTGCGTTTGGCGGACGAGAGGCTTGCGC
GCGCCCTGCGCGCCGCCAGCCTGTCTGAACTCTCGGTGTCTATCGCACATGAGCTCAATCAGCCGCTGCAGGCGGTCGTG
GCCAATGCCGGCGCGTTTCAGAGGTGGCTGACTGCGGATCCGCCAAATTTCGATCACGCCGGCCGGGTCGCTCAGAAAAT
CATCAGAAACGCCGACGCCGCGGCGCAGGTGATCGGACGCATTCGGTCTCTGTTCAGCAAGACCGAGGGCGAACCGCAGC
CGCTCGATCTTAATGCTCTGATCCGCGAAGTGTGTGAGCTCATGGGCGACAGGCTCGCATCGAGCCGCGTCATGCTGGAG
CTCGACCTGGATCCCGAGCTCCCTGCGACGGCTGCCGATCACGTCCAGATGGAGCAGGTCGTCCTCAACCTTGTCCGCAA
CGGCATAGAAGCGATGCAGGACGTCAGCACCACCGCGCGAAGCTTGCGGATCGTATCGCGCGGTCAGGATGACGGAACCG
TCGAGGTCGAAGTGCGAGATCGCGGCCGCGGGCTCAGCGATCCGGAACGCATTTTCGAGGCGTTCTACACGACCAAACCG
GATGGAATGGGAATGGGCCTGCCAATCTGCCGTTCCATCGTCGAGGCGCACTATGGCCGGGTTTGGGCGAAAAATGTCGA
GGGTGGAGGAGCATCCATCATCTTTAGCCTCCCCATCCGCGCTGCCGATCCGTCCGCGACACGCTCCGCCGCGACGATAA
GCGCCTAA

Upstream 100 bases:

>100_bases
GCGGGTTCGTTCGCATCCCACGCGATACGCCTCGGACAAATGGGCTGCAACGGACCGGGATCGCGAGACCCGAGCAGATG
CGGTCGCGAGAGGGTCTCGA

Downstream 100 bases:

>100_bases
TTGTGTGCGCCTTCAGAGACTGATTCGGCGATCGGCCAACGACTGCCCGATCTCGATGAGCGCGTTGGCCAGAATGTACA
AGATCCCGAAAACAATCGCG

Product: two component sensor-kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MELRSIRQRRVVAGAIGTGSVLLALFTGEPSGLLVAIAAVCICLGWKAGLAATAAGGLICALILMAPGYAVEPGLVRFVA
FVAATFGLWLVIKIFRTISFYDRVYQGAGPNVTDIPGLGWSAYPDGRLRFVNSAVLDYLGVTVEEMREIMDADDFSWWLR
FVHPDDVDTSMAQWRHSVETGEPMLAEQRLRRFDGSYRWFRDSGVASRDERGRIVGWYGHTEDIDDRRKAEAALRQSERE
LRLLVDTVPTMIWLMTPAGLPYYFNKRFVDWAGIESAKEPRGTRQFASHVELFHPDDRAAVKAVFQKSFARGEALQHKAR
LCRKDGEYRWIDSRFEPLRDEDGTIVRWYGVNFDIDDQVRAQEALRLADERLARALRAASLSELSVSIAHELNQPLQAVV
ANAGAFQRWLTADPPNFDHAGRVAQKIIRNADAAAQVIGRIRSLFSKTEGEPQPLDLNALIREVCELMGDRLASSRVMLE
LDLDPELPATAADHVQMEQVVLNLVRNGIEAMQDVSTTARSLRIVSRGQDDGTVEVEVRDRGRGLSDPERIFEAFYTTKP
DGMGMGLPICRSIVEAHYGRVWAKNVEGGGASIIFSLPIRAADPSATRSAATISA

Sequences:

>Translated_615_residues
MELRSIRQRRVVAGAIGTGSVLLALFTGEPSGLLVAIAAVCICLGWKAGLAATAAGGLICALILMAPGYAVEPGLVRFVA
FVAATFGLWLVIKIFRTISFYDRVYQGAGPNVTDIPGLGWSAYPDGRLRFVNSAVLDYLGVTVEEMREIMDADDFSWWLR
FVHPDDVDTSMAQWRHSVETGEPMLAEQRLRRFDGSYRWFRDSGVASRDERGRIVGWYGHTEDIDDRRKAEAALRQSERE
LRLLVDTVPTMIWLMTPAGLPYYFNKRFVDWAGIESAKEPRGTRQFASHVELFHPDDRAAVKAVFQKSFARGEALQHKAR
LCRKDGEYRWIDSRFEPLRDEDGTIVRWYGVNFDIDDQVRAQEALRLADERLARALRAASLSELSVSIAHELNQPLQAVV
ANAGAFQRWLTADPPNFDHAGRVAQKIIRNADAAAQVIGRIRSLFSKTEGEPQPLDLNALIREVCELMGDRLASSRVMLE
LDLDPELPATAADHVQMEQVVLNLVRNGIEAMQDVSTTARSLRIVSRGQDDGTVEVEVRDRGRGLSDPERIFEAFYTTKP
DGMGMGLPICRSIVEAHYGRVWAKNVEGGGASIIFSLPIRAADPSATRSAATISA
>Mature_615_residues
MELRSIRQRRVVAGAIGTGSVLLALFTGEPSGLLVAIAAVCICLGWKAGLAATAAGGLICALILMAPGYAVEPGLVRFVA
FVAATFGLWLVIKIFRTISFYDRVYQGAGPNVTDIPGLGWSAYPDGRLRFVNSAVLDYLGVTVEEMREIMDADDFSWWLR
FVHPDDVDTSMAQWRHSVETGEPMLAEQRLRRFDGSYRWFRDSGVASRDERGRIVGWYGHTEDIDDRRKAEAALRQSERE
LRLLVDTVPTMIWLMTPAGLPYYFNKRFVDWAGIESAKEPRGTRQFASHVELFHPDDRAAVKAVFQKSFARGEALQHKAR
LCRKDGEYRWIDSRFEPLRDEDGTIVRWYGVNFDIDDQVRAQEALRLADERLARALRAASLSELSVSIAHELNQPLQAVV
ANAGAFQRWLTADPPNFDHAGRVAQKIIRNADAAAQVIGRIRSLFSKTEGEPQPLDLNALIREVCELMGDRLASSRVMLE
LDLDPELPATAADHVQMEQVVLNLVRNGIEAMQDVSTTARSLRIVSRGQDDGTVEVEVRDRGRGLSDPERIFEAFYTTKP
DGMGMGLPICRSIVEAHYGRVWAKNVEGGGASIIFSLPIRAADPSATRSAATISA

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=31.8965517241379, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=27.1186440677966, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788393, Length=224, Percent_Identity=29.0178571428571, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI48994928, Length=397, Percent_Identity=22.9219143576826, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790300, Length=248, Percent_Identity=27.0161290322581, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 68320; Mature: 68320

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRSIRQRRVVAGAIGTGSVLLALFTGEPSGLLVAIAAVCICLGWKAGLAATAAGGLIC
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALILMAPGYAVEPGLVRFVAFVAATFGLWLVIKIFRTISFYDRVYQGAGPNVTDIPGLGW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAYPDGRLRFVNSAVLDYLGVTVEEMREIMDADDFSWWLRFVHPDDVDTSMAQWRHSVET
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHCC
GEPMLAEQRLRRFDGSYRWFRDSGVASRDERGRIVGWYGHTEDIDDRRKAEAALRQSERE
CCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LRLLVDTVPTMIWLMTPAGLPYYFNKRFVDWAGIESAKEPRGTRQFASHVELFHPDDRAA
HHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
VKAVFQKSFARGEALQHKARLCRKDGEYRWIDSRFEPLRDEDGTIVRWYGVNFDIDDQVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHH
AQEALRLADERLARALRAASLSELSVSIAHELNQPLQAVVANAGAFQRWLTADPPNFDHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCHH
GRVAQKIIRNADAAAQVIGRIRSLFSKTEGEPQPLDLNALIREVCELMGDRLASSRVMLE
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
LDLDPELPATAADHVQMEQVVLNLVRNGIEAMQDVSTTARSLRIVSRGQDDGTVEVEVRD
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
RGRGLSDPERIFEAFYTTKPDGMGMGLPICRSIVEAHYGRVWAKNVEGGGASIIFSLPIR
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCC
AADPSATRSAATISA
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MELRSIRQRRVVAGAIGTGSVLLALFTGEPSGLLVAIAAVCICLGWKAGLAATAAGGLIC
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALILMAPGYAVEPGLVRFVAFVAATFGLWLVIKIFRTISFYDRVYQGAGPNVTDIPGLGW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAYPDGRLRFVNSAVLDYLGVTVEEMREIMDADDFSWWLRFVHPDDVDTSMAQWRHSVET
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHCC
GEPMLAEQRLRRFDGSYRWFRDSGVASRDERGRIVGWYGHTEDIDDRRKAEAALRQSERE
CCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
LRLLVDTVPTMIWLMTPAGLPYYFNKRFVDWAGIESAKEPRGTRQFASHVELFHPDDRAA
HHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
VKAVFQKSFARGEALQHKARLCRKDGEYRWIDSRFEPLRDEDGTIVRWYGVNFDIDDQVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHH
AQEALRLADERLARALRAASLSELSVSIAHELNQPLQAVVANAGAFQRWLTADPPNFDHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCHH
GRVAQKIIRNADAAAQVIGRIRSLFSKTEGEPQPLDLNALIREVCELMGDRLASSRVMLE
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
LDLDPELPATAADHVQMEQVVLNLVRNGIEAMQDVSTTARSLRIVSRGQDDGTVEVEVRD
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
RGRGLSDPERIFEAFYTTKPDGMGMGLPICRSIVEAHYGRVWAKNVEGGGASIIFSLPIR
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCC
AADPSATRSAATISA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]