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The map label for this gene is ydjA [H]

Identifier: 13471043

GI number: 13471043

Start: 735453

End: 736037

Strand: Reverse

Name: ydjA [H]

Synonym: mll0911

Alternate gene names: 13471043

Gene position: 736037-735453 (Counterclockwise)

Preceding gene: 13471045

Following gene: 13471042

Centisome position: 10.46

GC content: 65.47

Gene sequence:

>585_bases
ATGGCGTCGCCGATTATCGACTTCCTGCTGACCCGAAATTCAGCGCCGATTCCCGACCTCAAGGAGCCGGCGCCCAACGA
CGCCGAGATCGCAACGATGATCGCCGCCGCCACGCGCGTGCCTGACCATGGCCGGCTCGAACCCTGGCGCTTCATCCTCT
ATCGCGGCGATGTCCGCATCGAGATCGGCAGGAAGCTGGCGGCGCTTGCCGAACAGCGGGAAGGGCCGCTGCCCGAGGGC
CGCCGCAACCAGGAACTGGCGCGCTTTTCGCGCGCGCCGCTGGTGATCGGCGTGGTGTCGGTGCCGAAGGAGAACCCCAA
GATCCCGCAATGGGAGATGTTCCTGTCCGGCGGCATGGCGGCGATGAACCTGATAATATCAGCCAATGCGCTGGGCTATG
GCACCAACATGATCAGCAACTGGTATTCCGACGTGCCGGAGGGCAGGGCGATCCTCGGACTGGCGCCGCAGGAGCGCGTC
GTCGGTTTCATCCATATCGGCTCTTATGCCGGGCCGGCGCCGGAGCGGCCACGGCCCGATCCGGCAAAGCTCTATGCCGA
CTACTCAGGCTCTTGGGCGGACTGA

Upstream 100 bases:

>100_bases
TAGACTCTTCAGCCCGGCGCTTGCGCGCCTTTGCACGAGCCGCCCGAATTCCCGATGGTGCGCTTCAGCTCAAAACAGAG
TGTTCAGGAGACCTGCGCCC

Downstream 100 bases:

>100_bases
ATGTTCTACGAACCGTCCAAGGGGCACGGGCTGCCGCATGATCCGTCGAAGGCGATCGTGGCGCCGCGGCCGATCGGCTG
GATATCGACGCTGAATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MASPIIDFLLTRNSAPIPDLKEPAPNDAEIATMIAAATRVPDHGRLEPWRFILYRGDVRIEIGRKLAALAEQREGPLPEG
RRNQELARFSRAPLVIGVVSVPKENPKIPQWEMFLSGGMAAMNLIISANALGYGTNMISNWYSDVPEGRAILGLAPQERV
VGFIHIGSYAGPAPERPRPDPAKLYADYSGSWAD

Sequences:

>Translated_194_residues
MASPIIDFLLTRNSAPIPDLKEPAPNDAEIATMIAAATRVPDHGRLEPWRFILYRGDVRIEIGRKLAALAEQREGPLPEG
RRNQELARFSRAPLVIGVVSVPKENPKIPQWEMFLSGGMAAMNLIISANALGYGTNMISNWYSDVPEGRAILGLAPQERV
VGFIHIGSYAGPAPERPRPDPAKLYADYSGSWAD
>Mature_193_residues
ASPIIDFLLTRNSAPIPDLKEPAPNDAEIATMIAAATRVPDHGRLEPWRFILYRGDVRIEIGRKLAALAEQREGPLPEGR
RNQELARFSRAPLVIGVVSVPKENPKIPQWEMFLSGGMAAMNLIISANALGYGTNMISNWYSDVPEGRAILGLAPQERVV
GFIHIGSYAGPAPERPRPDPAKLYADYSGSWAD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=187, Percent_Identity=31.5508021390374, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21256; Mature: 21124

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPIIDFLLTRNSAPIPDLKEPAPNDAEIATMIAAATRVPDHGRLEPWRFILYRGDVRI
CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE
EIGRKLAALAEQREGPLPEGRRNQELARFSRAPLVIGVVSVPKENPKIPQWEMFLSGGMA
EHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCHH
AMNLIISANALGYGTNMISNWYSDVPEGRAILGLAPQERVVGFIHIGSYAGPAPERPRPD
HHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHEEEEEEECCCCCCCCCCCCCC
PAKLYADYSGSWAD
HHHEEECCCCCCCC
>Mature Secondary Structure 
ASPIIDFLLTRNSAPIPDLKEPAPNDAEIATMIAAATRVPDHGRLEPWRFILYRGDVRI
CCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEE
EIGRKLAALAEQREGPLPEGRRNQELARFSRAPLVIGVVSVPKENPKIPQWEMFLSGGMA
EHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCHH
AMNLIISANALGYGTNMISNWYSDVPEGRAILGLAPQERVVGFIHIGSYAGPAPERPRPD
HHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHEEEEEEECCCCCCCCCCCCCC
PAKLYADYSGSWAD
HHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]