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The map label for this gene is citE [H]

Identifier: 13471038

GI number: 13471038

Start: 730294

End: 731214

Strand: Direct

Name: citE [H]

Synonym: mlr0906

Alternate gene names: 13471038

Gene position: 730294-731214 (Clockwise)

Preceding gene: 13471037

Following gene: 13471041

Centisome position: 10.38

GC content: 66.88

Gene sequence:

>921_bases
ATGCACCAGACAAGCGATGATGCTGAAAAAGGCCGCCTGATGCGCTCGCTGCTGTTCGTTCCCGGCGATTCCGAGCGCAA
GCTGGAGAAAGGCTTTGGCGCCGGCGCCGACGTGCTGATCGTCGATCTCGAGGATTCCGTGGCGCTGCAGAACAAGGCAG
CCGCGCGAGACATTGCGGCACGCTTTATCGGCGAACGCAGGGGCCAAACCAGCTCGGCCATCTACATCAGGGTCAACGAC
CTTTCGACCGGACTAACGGATGACGATCTTGGCGCGCTCGTTCCGGTGAAGCCGGACGGGATCATGCTGCCGAAATCCAA
CAGCGGCCAGGATGTCCAGCAGCTCTCGGCAAAACTCAGGGTGGGCGAGGCCGAGAACGGCCTGCCCGACGGCTCGATCA
AAATCCTCCCGATCATCACCGAAACCCCAGCGGGTGTGCTCGCCGCCGCGACCTATGCCGGCGCGAGCGCGCGGCTCGCC
GGCCTCACCTGGGGCGCGGAAGACCTGTCGGCCGCGATCGGTGCGCGCGCGGCGCGCGACGAGCACGGCCGCTACACCGA
CGTATTCCGCCACGCTCGCCTGACGACCATCCTGGCGGCGGGTGCCGCGGAGGTCGCGGCAATCGACACCGTGTTCCCGA
ACTTTCGCGACATGGCGGCCTTCGCCATAGAATGCGCGGAGGCCGAGCGTGACGGCTTCACCGGCAAGATGGCGATCCAC
CCCGACCAGGTGCCCGTCATCAACGCCGCCTTCACGCCCTCGGCCGAGGCGGTGCAACAGTCGGCGGCGATCGTCGCGGC
GTTCGAGGCGGCGGGAAATCCCGGTGTCGTCGGCATCGACGGCAAGATGTTCGACCGCCCCCATCTGCGGCTGGCCGAAC
GGCTGCTGGCACGCGCCAAGGCAGCCGGAATCTCCGCTTAG

Upstream 100 bases:

>100_bases
CCACGGTCATCTCGGTGCGGGAATCGAAATCGAAGCCGGATCGCGGCATCGTCGAATTCGAACACCGCGCCTACAACCAG
CAAGGCGACCTCGTCGCCAA

Downstream 100 bases:

>100_bases
TCTGCCGAGCCTTTGCTCGTCAGTCCCGCGCCAGGACGATAATCCGGTCCTCCGGCAGATAGGTCAGCGCTTCCGACTTC
AGCGGATTGACGGTGACGCC

Product: citrate lyase beta chain

Products: NA

Alternate protein names: Citrase beta chain; Citrate (pro-3S)-lyase subunit beta; Citryl-CoA lyase subunit [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MHQTSDDAEKGRLMRSLLFVPGDSERKLEKGFGAGADVLIVDLEDSVALQNKAAARDIAARFIGERRGQTSSAIYIRVND
LSTGLTDDDLGALVPVKPDGIMLPKSNSGQDVQQLSAKLRVGEAENGLPDGSIKILPIITETPAGVLAAATYAGASARLA
GLTWGAEDLSAAIGARAARDEHGRYTDVFRHARLTTILAAGAAEVAAIDTVFPNFRDMAAFAIECAEAERDGFTGKMAIH
PDQVPVINAAFTPSAEAVQQSAAIVAAFEAAGNPGVVGIDGKMFDRPHLRLAERLLARAKAAGISA

Sequences:

>Translated_306_residues
MHQTSDDAEKGRLMRSLLFVPGDSERKLEKGFGAGADVLIVDLEDSVALQNKAAARDIAARFIGERRGQTSSAIYIRVND
LSTGLTDDDLGALVPVKPDGIMLPKSNSGQDVQQLSAKLRVGEAENGLPDGSIKILPIITETPAGVLAAATYAGASARLA
GLTWGAEDLSAAIGARAARDEHGRYTDVFRHARLTTILAAGAAEVAAIDTVFPNFRDMAAFAIECAEAERDGFTGKMAIH
PDQVPVINAAFTPSAEAVQQSAAIVAAFEAAGNPGVVGIDGKMFDRPHLRLAERLLARAKAAGISA
>Mature_306_residues
MHQTSDDAEKGRLMRSLLFVPGDSERKLEKGFGAGADVLIVDLEDSVALQNKAAARDIAARFIGERRGQTSSAIYIRVND
LSTGLTDDDLGALVPVKPDGIMLPKSNSGQDVQQLSAKLRVGEAENGLPDGSIKILPIITETPAGVLAAATYAGASARLA
GLTWGAEDLSAAIGARAARDEHGRYTDVFRHARLTTILAAGAAEVAAIDTVFPNFRDMAAFAIECAEAERDGFTGKMAIH
PDQVPVINAAFTPSAEAVQQSAAIVAAFEAAGNPGVVGIDGKMFDRPHLRLAERLLARAKAAGISA

Specific function: Represents a citryl-ACP lyase [H]

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily [H]

Homologues:

Organism=Homo sapiens, GI45545437, Length=298, Percent_Identity=30.5369127516779, Blast_Score=126, Evalue=3e-29,
Organism=Escherichia coli, GI87081764, Length=306, Percent_Identity=34.640522875817, Blast_Score=128, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17557458, Length=299, Percent_Identity=30.1003344481605, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR011206
- InterPro:   IPR006475
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: =4.1.3.6; =4.1.3.34 [H]

Molecular weight: Translated: 31998; Mature: 31998

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQTSDDAEKGRLMRSLLFVPGDSERKLEKGFGAGADVLIVDLEDSVALQNKAAARDIAA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
RFIGERRGQTSSAIYIRVNDLSTGLTDDDLGALVPVKPDGIMLPKSNSGQDVQQLSAKLR
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEECCCCCCCHHHHHHHHHHC
VGEAENGLPDGSIKILPIITETPAGVLAAATYAGASARLAGLTWGAEDLSAAIGARAARD
CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHH
EHGRYTDVFRHARLTTILAAGAAEVAAIDTVFPNFRDMAAFAIECAEAERDGFTGKMAIH
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
PDQVPVINAAFTPSAEAVQQSAAIVAAFEAAGNPGVVGIDGKMFDRPHLRLAERLLARAK
CCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
AAGISA
HCCCCC
>Mature Secondary Structure
MHQTSDDAEKGRLMRSLLFVPGDSERKLEKGFGAGADVLIVDLEDSVALQNKAAARDIAA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
RFIGERRGQTSSAIYIRVNDLSTGLTDDDLGALVPVKPDGIMLPKSNSGQDVQQLSAKLR
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEECCCCCCCHHHHHHHHHHC
VGEAENGLPDGSIKILPIITETPAGVLAAATYAGASARLAGLTWGAEDLSAAIGARAARD
CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHH
EHGRYTDVFRHARLTTILAAGAAEVAAIDTVFPNFRDMAAFAIECAEAERDGFTGKMAIH
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
PDQVPVINAAFTPSAEAVQQSAAIVAAFEAAGNPGVVGIDGKMFDRPHLRLAERLLARAK
CCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
AAGISA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]