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The map label for this gene is hofQ [C]

Identifier: 13471032

GI number: 13471032

Start: 721798

End: 723183

Strand: Reverse

Name: hofQ [C]

Synonym: mll0899

Alternate gene names: 13471032

Gene position: 723183-721798 (Counterclockwise)

Preceding gene: 13471033

Following gene: 13471031

Centisome position: 10.28

GC content: 62.77

Gene sequence:

>1386_bases
ATGGCTGCCGCGCTGGTTGCGGGCGCAATGCTCGCTTTGCCCGGCGTGGCCAAGGCGGACAATGACATCGTCTATGTCTC
GGCGACCAAGAATGCGTCGATCAAGGTCGCCAAGGGCAAGCCCAAGACGATCGTGACGAATGCCGCCTTCTACCAGATCG
TCATCGGCGATCCTGAGATCGCCAACGTCAATCCACTGACCGACAAATCCTTCTATGTGCTCGGCAACAATCTCGGCACC
ACCGGCATTGCGCTGTTCGACGAGAAGAAGCAGCTCGTCGGCACCGTCGACATCGAAGTGACGCTCGACACGGATCAGCT
GGCCAGCACCATCCGCGCCAGCGTGCCGGACGCCAAGATCAAGGTCGGCTCGGCCAATGGCCGTGTCGTGCTGTCGGGCG
AGGCGGATGATGCGGTCGCCGCCGAAAAGGCAAACAAGATCGCAACGCGCTTTTCCGGCACAGAGGAAGTGATCAACTCG
GTCAACATCTCGTCGTCGCAGCAGGTTCAGCTCAACGTCCGCTTCGTCGAGATCAACCGCCAGGCGGGGCAGGATCTGGG
TGCCAAATACAGTGCCAATTTTGCCTACGGTTTCGGCGGACGCGACGTTTCGCTCGACCCAGGAACCGTGCCGGCGGCCG
GCACCGGCGAAATCATCGGCCGGCTGCTGTCGAACGGCGTGTCGATCGATATCGCCATCAAGGCCCTGGAAGAGCGCGGT
CTTGCCCGGCGGTTGGCGGAACCGAACCTGATCGCCCGCTCCGGCGAGACGGCGAGCTTCCTGGCCGGCGGCGAATTCCC
GATCCCGGTCTCTGAAGACAACGGCAAGATCTCCGTCAGCTACAAGAAATACGGCGTCAGCCTGGACTTCACGCCGACCG
TGCTCAAGGACGGGCTGGTCAGCCTCGACATCGCGCCGGAAGTCTCCTCCATCGATGCGTCGTCCTCCTATAACATCGGC
ACTATCTCCGTGCCGGGCTTCATCGTGCGCCGCGCCAAGACCTCCGTCGATCTCAAGAACGGCCAGAGCTTCATGATCGC
GGGACTGCTGCAGTCGCAAAACGACATCACCACATCGCGCATTCCCGGCCTCGGCAAGATGCCGGTGCTCGGGGCGCTGT
TCTCGTCGAAATCCTACCAGCGGCGCGAGACCGATCTGGTCATCATCGTCACGCCCTACCTGGTCAAGCCGGTCGATCCG
TCGAAGAAAATGGTCGAGCCGACCGACGGCACGCGGCCGGCCAGCAATGTCGACTATTTCCTCAACAACACCGAGGAAGT
GAAGGCATCGGACGCCGGCCGGGCGCTGGCGCTGGCCGATGGCAGCGCCGCACGGACCGCTCCCACCACCACGGTCGGGC
ACTTCCTCGACCTGCCGAAGGACTGA

Upstream 100 bases:

>100_bases
CCAGAAGTAAAGGCCGGTGGGGACCGGACGGGACAGGGCAATGTTGATGTGTACCCTATATCGAATGATGGATCGATCGC
GCTTTGCGCGCGCTCTGGCG

Downstream 100 bases:

>100_bases
AGCCATGCGTCTGGTCCTGAGATCGAGTGTCGCCTTGCTCCTTGCCGTTTTGGCCGGCGGCTGCACCAGCGACGATTACA
TACGCAGCGAAGGGGTGACG

Product: secretory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAAALVAGAMLALPGVAKADNDIVYVSATKNASIKVAKGKPKTIVTNAAFYQIVIGDPEIANVNPLTDKSFYVLGNNLGT
TGIALFDEKKQLVGTVDIEVTLDTDQLASTIRASVPDAKIKVGSANGRVVLSGEADDAVAAEKANKIATRFSGTEEVINS
VNISSSQQVQLNVRFVEINRQAGQDLGAKYSANFAYGFGGRDVSLDPGTVPAAGTGEIIGRLLSNGVSIDIAIKALEERG
LARRLAEPNLIARSGETASFLAGGEFPIPVSEDNGKISVSYKKYGVSLDFTPTVLKDGLVSLDIAPEVSSIDASSSYNIG
TISVPGFIVRRAKTSVDLKNGQSFMIAGLLQSQNDITTSRIPGLGKMPVLGALFSSKSYQRRETDLVIIVTPYLVKPVDP
SKKMVEPTDGTRPASNVDYFLNNTEEVKASDAGRALALADGSAARTAPTTTVGHFLDLPKD

Sequences:

>Translated_461_residues
MAAALVAGAMLALPGVAKADNDIVYVSATKNASIKVAKGKPKTIVTNAAFYQIVIGDPEIANVNPLTDKSFYVLGNNLGT
TGIALFDEKKQLVGTVDIEVTLDTDQLASTIRASVPDAKIKVGSANGRVVLSGEADDAVAAEKANKIATRFSGTEEVINS
VNISSSQQVQLNVRFVEINRQAGQDLGAKYSANFAYGFGGRDVSLDPGTVPAAGTGEIIGRLLSNGVSIDIAIKALEERG
LARRLAEPNLIARSGETASFLAGGEFPIPVSEDNGKISVSYKKYGVSLDFTPTVLKDGLVSLDIAPEVSSIDASSSYNIG
TISVPGFIVRRAKTSVDLKNGQSFMIAGLLQSQNDITTSRIPGLGKMPVLGALFSSKSYQRRETDLVIIVTPYLVKPVDP
SKKMVEPTDGTRPASNVDYFLNNTEEVKASDAGRALALADGSAARTAPTTTVGHFLDLPKD
>Mature_460_residues
AAALVAGAMLALPGVAKADNDIVYVSATKNASIKVAKGKPKTIVTNAAFYQIVIGDPEIANVNPLTDKSFYVLGNNLGTT
GIALFDEKKQLVGTVDIEVTLDTDQLASTIRASVPDAKIKVGSANGRVVLSGEADDAVAAEKANKIATRFSGTEEVINSV
NISSSQQVQLNVRFVEINRQAGQDLGAKYSANFAYGFGGRDVSLDPGTVPAAGTGEIIGRLLSNGVSIDIAIKALEERGL
ARRLAEPNLIARSGETASFLAGGEFPIPVSEDNGKISVSYKKYGVSLDFTPTVLKDGLVSLDIAPEVSSIDASSSYNIGT
ISVPGFIVRRAKTSVDLKNGQSFMIAGLLQSQNDITTSRIPGLGKMPVLGALFSSKSYQRRETDLVIIVTPYLVKPVDPS
KKMVEPTDGTRPASNVDYFLNNTEEVKASDAGRALALADGSAARTAPTTTVGHFLDLPKD

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=268, Percent_Identity=28.3582089552239, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082242, Length=165, Percent_Identity=30.9090909090909, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 48382; Mature: 48251

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50914 BON ; PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAALVAGAMLALPGVAKADNDIVYVSATKNASIKVAKGKPKTIVTNAAFYQIVIGDPEI
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECEEEEEEECCCCC
ANVNPLTDKSFYVLGNNLGTTGIALFDEKKQLVGTVDIEVTLDTDQLASTIRASVPDAKI
CCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHCCCCCEE
KVGSANGRVVLSGEADDAVAAEKANKIATRFSGTEEVINSVNISSSQQVQLNVRFVEINR
EEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEEEEEEEC
QAGQDLGAKYSANFAYGFGGRDVSLDPGTVPAAGTGEIIGRLLSNGVSIDIAIKALEERG
CCCCCCCCEEECCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHCC
LARRLAEPNLIARSGETASFLAGGEFPIPVSEDNGKISVSYKKYGVSLDFTPTVLKDGLV
HHHHHCCCCEEEECCCCEEEEECCCCCCEECCCCCEEEEEEEEECEEECCCHHHHHCCCE
SLDIAPEVSSIDASSSYNIGTISVPGFIVRRAKTSVDLKNGQSFMIAGLLQSQNDITTSR
EEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEECCCCEEEEEEEECCCCCCCHHH
IPGLGKMPVLGALFSSKSYQRRETDLVIIVTPYLVKPVDPSKKMVEPTDGTRPASNVDYF
CCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCEEECCCCCCCEECCCCCCCCCCCCCEE
LNNTEEVKASDAGRALALADGSAARTAPTTTVGHFLDLPKD
ECCCHHEECCCCCCEEEEECCCCCCCCCCCCHHHEECCCCC
>Mature Secondary Structure 
AAALVAGAMLALPGVAKADNDIVYVSATKNASIKVAKGKPKTIVTNAAFYQIVIGDPEI
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECEEEEEEECCCCC
ANVNPLTDKSFYVLGNNLGTTGIALFDEKKQLVGTVDIEVTLDTDQLASTIRASVPDAKI
CCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHCCCCCEE
KVGSANGRVVLSGEADDAVAAEKANKIATRFSGTEEVINSVNISSSQQVQLNVRFVEINR
EEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEEEEEEEC
QAGQDLGAKYSANFAYGFGGRDVSLDPGTVPAAGTGEIIGRLLSNGVSIDIAIKALEERG
CCCCCCCCEEECCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHCC
LARRLAEPNLIARSGETASFLAGGEFPIPVSEDNGKISVSYKKYGVSLDFTPTVLKDGLV
HHHHHCCCCEEEECCCCEEEEECCCCCCEECCCCCEEEEEEEEECEEECCCHHHHHCCCE
SLDIAPEVSSIDASSSYNIGTISVPGFIVRRAKTSVDLKNGQSFMIAGLLQSQNDITTSR
EEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEECCCCEEEEEEEECCCCCCCHHH
IPGLGKMPVLGALFSSKSYQRRETDLVIIVTPYLVKPVDPSKKMVEPTDGTRPASNVDYF
CCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCEEECCCCCCCEECCCCCCCCCCCCCEE
LNNTEEVKASDAGRALALADGSAARTAPTTTVGHFLDLPKD
ECCCHHEECCCCCCEEEEECCCCCCCCCCCCHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]