Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471026
Identifier: 13471026
GI number: 13471026
Start: 715197
End: 716042
Strand: Reverse
Name: 13471026
Synonym: mll0891
Alternate gene names: NA
Gene position: 716042-715197 (Counterclockwise)
Preceding gene: 13471027
Following gene: 13471025
Centisome position: 10.18
GC content: 62.65
Gene sequence:
>846_bases ATGAGTGCTGGGCCGAATAGCATTCTCAACGTGACAAAAGGCGCTCCATTTGCGCTGGATGCTGCATCATTTGGGATGAT TGCGGCCGGCGTAGCGGCGATCGATCTGTCCAATGTGTTCACCATCGTGCACAATTCGCTCCGTCACGGCCCCGGCGTCG CACTGTGGATCCCGAGCGTAGCCGAGGCGTCGAGCGGCGTGTCGGCTTTGGCCGCGGTGTGGATCATCGCGTCGGCTCTG CGGCTCGCAAGTCCAGGGCGGATGCACTGGGGCGGCGTGGCATTGGTTCACGCCTTGGCCAGTCTCTGCTTCTCGGCGCA ACATGTGCTGGGCATGGTGGCGCTCAGAAAGGTCATCTATGGCGTGATGGGTGCCCACTATCAATTTGAGCTCGGCGATT GGCTCTATGAATATCGGAAGGATTTGCTGACTTACCTGATCATCGCGGCTTGCCTGGCCGCCTTCCGCTCGCGCGCAGAG AACGTCAGGCGCGAAGCCGCCCCGCGGTTCGAGAGTGAACCCGTTTTCGATATCGACATTGGGGCGCGTACGATACGCGT CCCTCTGCGAGCGGTATTGGCTCTACGCGCCGCCGGCAACTATGTGGAAGTGCTCCTGGAAGACGGACGGCGGCTGCTCG TTCGCGGGACGCTTACCTCCTATGCGGAACGACTGGTCCCATCCGGCTTCGAACGCACGCATCGATCTTGGTTGGTCAAC AGGGCGCGCGTAACAGGCCTTCGCCCCGCCGGCTCGGGTGACATGCACCTGGATCTCCCCGGCGGCTGCGAGGCGCCCCT CTCGCGCCGCTTCCCGGAGGCGCTGCGTCGGCTAAAACAGAAGTAG
Upstream 100 bases:
>100_bases TATCGCGGGTATTTCCCCGGAGGGAGAAGGCGCAGTATGATTGAACCGTTCTGGCGGACAAGGATCGCGGGACCGCCGGC GCGAGAACAGGGATGAAACA
Downstream 100 bases:
>100_bases CAGGCGCCGCTGTCGAAGATCGGCAAGGAACTGGCGGTTCAAAAACCGTCGGCATCTGCAAAATCAGCAAATGAGAGTCG ACAAATCCGGAGCGGTGACG
Product: regulatory protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; AlgR/AgrA/LytR Family Regulatory Protein; Transmembrane Sensory Transduction Protein LytT
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSAGPNSILNVTKGAPFALDAASFGMIAAGVAAIDLSNVFTIVHNSLRHGPGVALWIPSVAEASSGVSALAAVWIIASAL RLASPGRMHWGGVALVHALASLCFSAQHVLGMVALRKVIYGVMGAHYQFELGDWLYEYRKDLLTYLIIAACLAAFRSRAE NVRREAAPRFESEPVFDIDIGARTIRVPLRAVLALRAAGNYVEVLLEDGRRLLVRGTLTSYAERLVPSGFERTHRSWLVN RARVTGLRPAGSGDMHLDLPGGCEAPLSRRFPEALRRLKQK
Sequences:
>Translated_281_residues MSAGPNSILNVTKGAPFALDAASFGMIAAGVAAIDLSNVFTIVHNSLRHGPGVALWIPSVAEASSGVSALAAVWIIASAL RLASPGRMHWGGVALVHALASLCFSAQHVLGMVALRKVIYGVMGAHYQFELGDWLYEYRKDLLTYLIIAACLAAFRSRAE NVRREAAPRFESEPVFDIDIGARTIRVPLRAVLALRAAGNYVEVLLEDGRRLLVRGTLTSYAERLVPSGFERTHRSWLVN RARVTGLRPAGSGDMHLDLPGGCEAPLSRRFPEALRRLKQK >Mature_280_residues SAGPNSILNVTKGAPFALDAASFGMIAAGVAAIDLSNVFTIVHNSLRHGPGVALWIPSVAEASSGVSALAAVWIIASALR LASPGRMHWGGVALVHALASLCFSAQHVLGMVALRKVIYGVMGAHYQFELGDWLYEYRKDLLTYLIIAACLAAFRSRAEN VRREAAPRFESEPVFDIDIGARTIRVPLRAVLALRAAGNYVEVLLEDGRRLLVRGTLTSYAERLVPSGFERTHRSWLVNR ARVTGLRPAGSGDMHLDLPGGCEAPLSRRFPEALRRLKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30420; Mature: 30289
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50930 HTH_LYTTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGPNSILNVTKGAPFALDAASFGMIAAGVAAIDLSNVFTIVHNSLRHGPGVALWIPSV CCCCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH AEASSGVSALAAVWIIASALRLASPGRMHWGGVALVHALASLCFSAQHVLGMVALRKVIY HHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVMGAHYQFELGDWLYEYRKDLLTYLIIAACLAAFRSRAENVRREAAPRFESEPVFDIDI HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC GARTIRVPLRAVLALRAAGNYVEVLLEDGRRLLVRGTLTSYAERLVPSGFERTHRSWLVN CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHH RARVTGLRPAGSGDMHLDLPGGCEAPLSRRFPEALRRLKQK HHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SAGPNSILNVTKGAPFALDAASFGMIAAGVAAIDLSNVFTIVHNSLRHGPGVALWIPSV CCCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH AEASSGVSALAAVWIIASALRLASPGRMHWGGVALVHALASLCFSAQHVLGMVALRKVIY HHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVMGAHYQFELGDWLYEYRKDLLTYLIIAACLAAFRSRAENVRREAAPRFESEPVFDIDI HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC GARTIRVPLRAVLALRAAGNYVEVLLEDGRRLLVRGTLTSYAERLVPSGFERTHRSWLVN CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHH RARVTGLRPAGSGDMHLDLPGGCEAPLSRRFPEALRRLKQK HHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA