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The map label for this gene is yedY [H]

Identifier: 13471018

GI number: 13471018

Start: 705520

End: 706362

Strand: Direct

Name: yedY [H]

Synonym: mlr0879

Alternate gene names: 13471018

Gene position: 705520-706362 (Clockwise)

Preceding gene: 13471017

Following gene: 13471020

Centisome position: 10.03

GC content: 63.11

Gene sequence:

>843_bases
ATGACGACAAGACGACCGAGAGGAGTGCCTGACATGGCGAAGTTTGAGATCAGCCCCAATTTTCAGATCAGTCGAAGGAA
ATTCCTGACCGCCGCCAGCCTTGGCGCCTCCGGCATCATGCTGTCGGGCTGCGATGCCTTCGACAGCCAGTTGAGCATCG
GCAGCGGCCTGCGCAGCTTCCTCGAAAACGCCAATGGCCTGACATATCGCGCCCAACGCCTGCTTGCCGGCCGTGACGCG
CTGGCACCGGAATTCACCGAGGCCGACATCCGCCAGCCGCAGCGGCCGAACGGCGTTACCGCGCCTGACGATGACACCTA
TAAGGGCCTGCTCGCCAACAATTTCGCCGACTGGCGGCTGGAAGTCTCAGGCCTCGTCGAAAAGCCGCTGTCGCTCAGCC
GCGAGCAGCTTCAGAACATGCCGAGCCGCACCCAGATCACCCGCCACGACTGCGTCGAGGGTTGGAGCTGCATCGCCAAA
TGGACCGGCACGCCGCTGTCGCTGGTGCTCGACCAGGCGGTGGTCAAGCCGCAGGCGCGTTACGTCATGTTCCACTGCCT
CGACACGATCGACCGCAGCCTGTCCGGCGACATCAAATATTATGGCACGATCGACCTGATCGACGCCCGCCACCCGCAGA
CGATCCTCGCCTATGGCCTGAACGGCAAACCGCTCCCGGTCGAAAACGGCGCTCCGCTGCGTGTCCGCGTCGAGCGCCAG
CTCGGCTACAAGATGCCGAAGTACCTCTACAAGATCGAGTTGGTCGACGGCTTCGCCAATGTCGGCGGCGGCCGCGGCGG
CTATTGGGAAGACAATGGCTACGACTGGTACGGCGGGATTTGA

Upstream 100 bases:

>100_bases
GGCTTCTTCATCATCCACATCCTGATGATCCTGGCCGCCGGCCCGATCAACGAATTGCGCTCGATCATCACCGGCTGGTA
CCGCACCGACCCTCCCGCGC

Downstream 100 bases:

>100_bases
TGACCAGGGAATTAGCACACCGAGATCAGTGGCTTAAACCGCAGTATCTCAAGCCACTTTGTCGAGCAGCGGCCTCAGCG
CCGGATGGATCTCCGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTTRRPRGVPDMAKFEISPNFQISRRKFLTAASLGASGIMLSGCDAFDSQLSIGSGLRSFLENANGLTYRAQRLLAGRDA
LAPEFTEADIRQPQRPNGVTAPDDDTYKGLLANNFADWRLEVSGLVEKPLSLSREQLQNMPSRTQITRHDCVEGWSCIAK
WTGTPLSLVLDQAVVKPQARYVMFHCLDTIDRSLSGDIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQ
LGYKMPKYLYKIELVDGFANVGGGRGGYWEDNGYDWYGGI

Sequences:

>Translated_280_residues
MTTRRPRGVPDMAKFEISPNFQISRRKFLTAASLGASGIMLSGCDAFDSQLSIGSGLRSFLENANGLTYRAQRLLAGRDA
LAPEFTEADIRQPQRPNGVTAPDDDTYKGLLANNFADWRLEVSGLVEKPLSLSREQLQNMPSRTQITRHDCVEGWSCIAK
WTGTPLSLVLDQAVVKPQARYVMFHCLDTIDRSLSGDIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQ
LGYKMPKYLYKIELVDGFANVGGGRGGYWEDNGYDWYGGI
>Mature_279_residues
TTRRPRGVPDMAKFEISPNFQISRRKFLTAASLGASGIMLSGCDAFDSQLSIGSGLRSFLENANGLTYRAQRLLAGRDAL
APEFTEADIRQPQRPNGVTAPDDDTYKGLLANNFADWRLEVSGLVEKPLSLSREQLQNMPSRTQITRHDCVEGWSCIAKW
TGTPLSLVLDQAVVKPQARYVMFHCLDTIDRSLSGDIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQL
GYKMPKYLYKIELVDGFANVGGGRGGYWEDNGYDWYGGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=148, Percent_Identity=36.4864864864865, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 31125; Mature: 30994

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRPRGVPDMAKFEISPNFQISRRKFLTAASLGASGIMLSGCDAFDSQLSIGSGLRSF
CCCCCCCCCCCHHEEEECCCCEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
LENANGLTYRAQRLLAGRDALAPEFTEADIRQPQRPNGVTAPDDDTYKGLLANNFADWRL
HHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
EVSGLVEKPLSLSREQLQNMPSRTQITRHDCVEGWSCIAKWTGTPLSLVLDQAVVKPQAR
EEHHHHHCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
YVMFHCLDTIDRSLSGDIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQ
HHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHH
LGYKMPKYLYKIELVDGFANVGGGRGGYWEDNGYDWYGGI
HCCCCCHHEEEEEEEHHHHHCCCCCCCCCCCCCEECCCCC
>Mature Secondary Structure 
TTRRPRGVPDMAKFEISPNFQISRRKFLTAASLGASGIMLSGCDAFDSQLSIGSGLRSF
CCCCCCCCCCHHEEEECCCCEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
LENANGLTYRAQRLLAGRDALAPEFTEADIRQPQRPNGVTAPDDDTYKGLLANNFADWRL
HHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
EVSGLVEKPLSLSREQLQNMPSRTQITRHDCVEGWSCIAKWTGTPLSLVLDQAVVKPQAR
EEHHHHHCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
YVMFHCLDTIDRSLSGDIKYYGTIDLIDARHPQTILAYGLNGKPLPVENGAPLRVRVERQ
HHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHH
LGYKMPKYLYKIELVDGFANVGGGRGGYWEDNGYDWYGGI
HCCCCCHHEEEEEEEHHHHHCCCCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA